Evidence map›Paper›PMID 27821720›Full record

ArticlePlant physiology2017

Ubiquitin-Proteasome Dependent Regulation of the GOLDEN2-LIKE 1 Transcription Factor in Response to Plastid Signals.

Mitsuaki Tokumaru, Fumi Adachi, Makoto Toda, Yasuko Ito-Inaba, Fumiko Yazu, Yoshihiro Hirosawa, Yoichi Sakakibara, Masahito Suiko, Tomohiro Kakizaki, Takehito Inaba

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 98 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Mitsuaki TokumaruDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).
Fumi AdachiDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).
Makoto TodaDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).
Yasuko Ito-InabaDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).ORCID 0000-0001-9598-5196
Fumiko YazuDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).
Yoshihiro HirosawaDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).
Yoichi SakakibaraDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).ORCID 0000-0001-9031-422X
Masahito SuikoDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).ORCID 0000-0002-9561-4579
Tomohiro KakizakiDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.).ORCID 0000-0002-3636-6616
Takehito InabaDepartment of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan (M.T., F.A., Y.I.-I., F.Y., Y.H., T.I.); tinaba@cc.miyazaki-u.ac.jp.ORCID 0000-0003-1750-454X
University of Miyazaki · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis (Arabidopsis thaliana) GOLDEN2-LIKE (GLK) transcription factors promote chloroplast biogenesis by regulating the expression of photosynthesis-related genes. Arabidopsis GLK1 is also known to participate in retrograde signaling from chloroplasts to the nucleus. To elucidate the mechanism by which GLK1 is regulated in response to plastid signals, we biochemically characterized Arabidopsis GLK1 protein. Expression analysis of GLK1 protein indicated that GLK1 accumulates in aerial tissues. Both tissue-specific and Suc-dependent accumulation of GLK1 were regulated primarily at the transcriptional level. In contrast, norflurazon- or lincomycin-treated gun1-101 mutant expressing normal levels of GLK1 mRNA failed to accumulate GLK1 protein, suggesting that plastid signals directly regulate the accumulation of GLK1 protein in a GUN1-independent manner. Treatment of the glk1glk2 mutant expressing functional GFP-GLK1 with a proteasome inhibitor, MG-132, induced the accumulation of polyubiquitinated GFP-GLK1. Furthermore, the level of endogenous GLK1 in plants with damaged plastids was partially restored when those plants were treated with MG-132. Collectively, these data indicate that the ubiquitin-proteasome system participates in the degradation of Arabidopsis GLK1 in response to plastid signals.

Indexed as

ArabidopsisArabidopsis ProteinsCell NucleusDNA-Binding ProteinsGene Expression Regulation, PlantGreen Fluorescent ProteinsLeupeptinsPlants, Genetically ModifiedPlastidsProteasome Endopeptidase ComplexProteasome InhibitorsTranscription FactorsUbiquitinArabidopsis Proteinsbenzyloxycarbonylleucyl-leucyl-leucine aldehydeDNA-Binding ProteinsGLK1 protein, ArabidopsisGreen Fluorescent ProteinsGUN1 protein, ArabidopsisLeupeptinsProteasome Endopeptidase ComplexProteasome InhibitorsTranscription FactorsUbiquitin

Identifiers

PMID27821720
PMCPMC5210752
OpenAlexW2550270807

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.