Evidence map›Paper›PMID 27821171›Full record

ArticleMalaria journal2016

Comparison of molecular quantification of Plasmodium falciparum gametocytes by Pfs25 qRT-PCR and QT-NASBA in relation to mosquito infectivity.

Helmi Pett, Bronner P Gonçalves, Alassane Dicko, Issa Nébié, Alfred B Tiono, Kjerstin Lanke, John Bradley, Ingrid Chen, Halimatou Diawara, Almahamoudou Mahamar and 10 more

Open access · goldAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Malaria journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

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  5. Molecular Markers for Sensitive Detection ofThe American journal of tropical medicine and hygiene · 2017
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  8. Histamine Ingestion byBiomolecules · 2021
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  14. HIV-1 Infection Is Associated With Increased Prevalence and Abundance ofFrontiers in cellular and infection microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 6 countries.

Helmi PettDepartment of Medical Microbiology, Radboud University Medical Center, Geert Grooteplein Zuid 26-28, 6500 HB, Nijmegen, The Netherlands.
Bronner P GonçalvesDepartment of Immunology and Infection, London School of Hygiene & Tropical Medicine, London, UK.
Alassane DickoMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Issa NébiéCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso.
Alfred B TionoCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso.
Kjerstin LankeDepartment of Medical Microbiology, Radboud University Medical Center, Geert Grooteplein Zuid 26-28, 6500 HB, Nijmegen, The Netherlands.
John BradleyMRC Tropical Epidemiology Group, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK.
Ingrid ChenDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA.
Halimatou DiawaraMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Almahamoudou MahamarMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Harouna M SoumareMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Sekou F TraoreMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Ibrahima BaberMalaria Research and Training Centre, Faculty of Pharmacy and Faculty of Medicine and Dentistry, University of Science, Techniques and Technologies of Bamako, Bamako, Mali.
Sodiomon B SirimaCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso.
Robert SauerweinDepartment of Medical Microbiology, Radboud University Medical Center, Geert Grooteplein Zuid 26-28, 6500 HB, Nijmegen, The Netherlands.
Joelle BrownDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA.
Roly GoslingDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA.
Ingrid FelgerMolecular Diagnostics Unit, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Chris DrakeleyDepartment of Immunology and Infection, London School of Hygiene & Tropical Medicine, London, UK.
Teun BousemaDepartment of Medical Microbiology, Radboud University Medical Center, Geert Grooteplein Zuid 26-28, 6500 HB, Nijmegen, The Netherlands. teun.bousema@radboudumc.nl.
University of Bamako · MLCentre National de Recherche et de Formation sur le Paludisme · BFLondon School of Hygiene & Tropical Medicine · GBUniversity of California, San Francisco · USRadboud University Medical Center · NLRadboud University Nijmegen · NLSwiss Tropical and Public Health Institute · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundQuantifying gametocyte densities in natural malaria infections is important to estimate malaria transmission potential. Two molecular methods (Pfs25 mRNA quantitative reverse transcriptase PCR (qRT-PCR) and Pfs25 mRNA quantitative nucleic acid sequence based amplification (QT-NASBA)) are commonly used to determine gametocyte densities in clinical and epidemiological studies and allow gametocyte detection at densities below the microscopic threshold for detection. Here, reproducibility of these measurements and the association between estimated gametocyte densities and mosquito infection rates were compared.

methodsTo quantify intra- and inter-assay variation of QT-NASBA and qRT-PCR, a series of experiments was performed using culture-derived mature Plasmodium falciparum gametocytes from three different parasite isolates (NF54, NF135, NF166). Pfs25 mRNA levels were also determined in samples from clinical trials in Mali and Burkina Faso using both methods. Agreement between the two methods and association with mosquito infection rates in membrane feeding assays were assessed.

resultsIntra- and inter-assay variability was larger in QT-NASBA compared to qRT-PCR, particularly at low gametocyte densities (< 1 gametocyte per μL). Logistic models, including log-transformed gametocytaemia estimated by QT-NASBA, explained variability in mosquito feeding experiment results as well as log-transformed gametocytaemia by qRT-PCR (marginal R

conclusionsThe experiments indicate that both qRT-PCR and QT-NASBA are of value for quantifying mature gametocytes in samples collected in field studies. For both assays, estimated gametocyte densities correlated well with mosquito infection rates. QT-NASBA is less reproducible than qRT-PCR, particularly for low gametocyte densities.

Indexed as

Burkina FasoChildClinical Trials as TopicFemaleHumansMaleMaliParasite LoadPlasmodium falciparumProtozoan ProteinsReal-Time Polymerase Chain ReactionReproducibility of ResultsSelf-Sustained Sequence ReplicationPfs25 protein, Plasmodium falciparumProtozoan ProteinsAnophelesGametocytesMalariaMosquitoqRT-PCRQT-NASBAQuantificationTransmission

Identifiers

PMID27821171
PMCPMC5100312
OpenAlexW2556688557

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.