Evidence map›Paper›PMID 27820806›Full record

ArticleNature structural & molecular biology2016

Large-scale ATP-independent nucleosome unfolding by a histone chaperone.

Maria E Valieva, Grigoriy A Armeev, Kseniya S Kudryashova, Nadezhda S Gerasimova, Alexey K Shaytan, Olga I Kulaeva, Laura L McCullough, Tim Formosa, Pavel G Georgiev, Mikhail P Kirpichnikov and 2 more

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Beyond Chaperoning: The Multifaceted Role of FACT in Chromatin Transactions.International journal of molecular sciences · 2025
    Review
  7. Article
  8. Article
  9. Facilitates Chromatin Transcription in Breast and Other Cancers.Advances in experimental medicine and biology · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Studying Chromatin Epigenetics with Fluorescence Microscopy.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Maria E ValievaBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Grigoriy A ArmeevBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Kseniya S KudryashovaBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Nadezhda S GerasimovaBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Alexey K ShaytanBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Olga I KulaevaBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Laura L McCulloughDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Tim FormosaDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Pavel G GeorgievInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Mikhail P KirpichnikovBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Vasily M StuditskyBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.
Alexey V FeofanovBiology Faculty, Lomonosov, Moscow State University, Moscow, Russia.

Funding

Biochemical, Genetic, and Genomic Analysis of Nucleosome Reorganization by FACTR01GM064649 · NIGMS · UNIVERSITY OF UTAH · PI FORMOSA, TIMOTHY G · 2002 to 2022
$6.4M
Mechanism Transcript Elongation in ChromatinR01GM058650 · NIGMS · WAYNE STATE UNIVERSITY · PI STUDITSKY, VASILY M · 1999 to 2015
$4.7M
Mechanism of yFACT Action during Chromatin TranscriptionR01GM119398 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI STILLMAN, DAVID J, STUDITSKY, VASILY M · 2017 to 2020
$1.3M
NIGMS NIH HHS R01 GM058650NIGMS NIH HHS R01 GM064649NIGMS NIH HHS R01 GM119398
6 · The paper itself

Abstract

DNA accessibility to regulatory proteins is substantially influenced by nucleosome structure and dynamics. The facilitates chromatin transcription (FACT) complex increases the accessibility of nucleosomal DNA, but the mechanism and extent of its nucleosome reorganization activity are unknown. Here we determined the effects of FACT from the yeast Saccharomyces cerevisiae on single nucleosomes by using single-particle Förster resonance energy transfer (spFRET) microscopy. FACT binding results in dramatic ATP-independent, symmetrical and reversible DNA uncoiling that affects at least 70% of the DNA within a nucleosome, occurs without apparent loss of histones and proceeds via an 'all-or-none' mechanism. A mutated version of FACT is defective in uncoiling, and a histone mutation that suppresses phenotypes caused by this FACT mutation in vivo restores the uncoiling activity in vitro. Thus, FACT-dependent nucleosome unfolding modulates the accessibility of nucleosomal DNA, and this activity is an important function of FACT in vivo.

Indexed as

Adenosine TriphosphateDNA-Binding ProteinsDNA, FungalFluorescence Resonance Energy TransferHigh Mobility Group ProteinsHistonesModels, MolecularMolecular ChaperonesNucleic Acid ConformationNucleosomesProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscriptional Elongation FactorsTranscription FactorsAdenosine TriphosphateDNA-Binding ProteinsDNA, FungalFACT protein, S cerevisiaeHigh Mobility Group ProteinsHistonesMolecular ChaperonesNucleosomesPOB3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSPT16 protein, S cerevisiaeTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID27820806
PMCPMC5518926

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.