Evidence map›Paper›PMID 27819260›Full record

ArticleScientific reports2016

Combination of OipA, BabA, and SabA as candidate biomarkers for predicting Helicobacter pylori-related gastric cancer.

Yu-Lin Su, Hsiang-Ling Huang, Bo-Shih Huang, Po-Chung Chen, Chien-Sheng Chen, Hong-Long Wang, Pin-Hsin Lin, Meng-Shu Chieh, Jiunn-Jong Wu, Jyh-Chin Yang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Article
  4. Article
  5. World journal of gastrointestinal oncology · 2025
    Review
  6. Evaluation of theAnti-cancer agents in medicinal chemistry · 2025
    Article
  7. Pathogens (Basel, Switzerland) · 2024
    Review
  8. Microorganisms · 2024
    Review
  9. Pathogenomics of Helicobacter pylori.Current topics in microbiology and immunology · 2023
    Review
  10. Article
  11. Frontiers in microbiology · 2022
    Review
  12. Review
  13. Whole-Genome Sequencing and Comparative Genomics of ThreePathogens (Basel, Switzerland) · 2021
    Article
  14. Cells · 2020
    Review
  15. Article
  16. Pathways of Gastric Carcinogenesis,International journal of molecular sciences · 2020
    Review
  17. Article
  18. Review
  19. Precancerous Gastric Lesions withBioMed research international · 2020
    Article
  20. Toxins · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Yu-Lin SuGraduate Institute of Biochemistry and Molecular Biology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Hsiang-Ling HuangGraduate Institute of Biochemistry and Molecular Biology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Bo-Shih HuangGraduate Institute of Biochemistry and Molecular Biology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Po-Chung ChenGraduate Institute of Systems Biology and Bioinformatics, National Central University, Taoyuan, Taiwan.
Chien-Sheng ChenGraduate Institute of Systems Biology and Bioinformatics, National Central University, Taoyuan, Taiwan.
Hong-Long WangDepartment of Statistics, National Taipei University, New Taipei City, Taiwan.
Pin-Hsin LinGraduate Institute of Biochemistry and Molecular Biology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Meng-Shu ChiehFirst Core Laboratory, College of Medicine, National Taiwan University, Taipei, Taiwan.
Jiunn-Jong WuDepartment of Medical Laboratory Science and Biotechnology, Center of Infectious Disease and Signaling Research, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Jyh-Chin YangDepartment of Internal Medicine, Hospital and College of Medicine, National Taiwan University, Taipei, Taiwan.
Lu-Ping ChowGraduate Institute of Biochemistry and Molecular Biology, College of Medicine, National Taiwan University, Taipei, Taiwan.
National Taiwan University · TWNational Central University · TWNational Cheng Kung University · TWNational Taipei University · TWNational Taiwan University Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori (H. pylori ) infection is a major cause of chronic gastritis and is highly related to duodenal ulcer (DU) and gastric cancer (GC). To identify H. pylori-related GC biomarkers with high seropositivity in GC patients, differences in levels of protein expression between H. pylori from GC and DU patients were analyzed by isobaric tag for relative and absolute quantitation (iTRAQ). In total, 99 proteins showed increased expression (>1.5-fold) in GC patients compared to DU patients, and 40 of these proteins were categorized by KEGG pathway. The four human disease-related adhesin identified, AlpA, OipA, BabA, and SabA, were potential GC-related antigens, with a higher seropositivity in GC patients (n = 76) than in non-GC patients (n = 100). Discrimination between GC and non-GC patients was improved using multiple antigens, with an odds ratio of 9.16 (95% CI, 2.99-28.07; p < 0.0001) for three antigens recognized. The optimized combination of OipA, BabA, and SabA gave a 77.3% correct prediction rate. A GC-related protein microarray was further developed using these antigens. The combination of OipA, BabA, and SabA showed significant improvement in the diagnostic accuracy and the protein microarray containing above antigens should provide a rapid and convenient diagnosis of H. pylori-associated GC.

Indexed as

Adhesins, BacterialAntibodies, BacterialAntigens, BacterialBacterial Outer Membrane ProteinsBiomarkersDuodenal UlcerHelicobacter InfectionsHelicobacter pyloriHumansImmunoassayOdds RatioPeptidesProtein Array AnalysisProteomicsStomach NeoplasmsUp-RegulationAdhesins, BacterialAntibodies, BacterialAntigens, BacterialBabA protein, Helicobacter pyloriBacterial Outer Membrane ProteinsBiomarkersOipA protein, Helicobacter pyloriPeptidesSabA protein, Helicobacter pylori

Identifiers

PMID27819260
PMCPMC5098209
OpenAlexW2552862768

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.