Evidence map›Paper›PMID 27818672›Full record

ArticleFrontiers in plant science2016

Detection of Favorable QTL Alleles and Candidate Genes for Lint Percentage by GWAS in Chinese Upland Cotton.

Junji Su, Shuli Fan, Libei Li, Hengling Wei, Caixiang Wang, Hantao Wang, Meizhen Song, Chi Zhang, Lijiao Gu, Shuqi Zhao and 4 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Combined genome and transcriptome analysis of boll weight and lint percentage traits in Gossypium barbadense.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Relief of GbDEAH12Nature communications · 2026
    Article
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  6. A GWAS identified loci and candidate genes associated with fiber quality traits in a new cotton MAGIC population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  7. Article
  8. Article
  9. Genetic dissection of lint percentage in short-season cotton using combined QTL mapping and RNA-seq.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  10. Genome-Wide Association Study of Lint Percentage inInternational journal of molecular sciences · 2023
    Article
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  16. Review
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  20. Genome-wide association mapping for agronomic traits in an 8-way Upland cotton MAGIC population by SLAF-seq.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Junji SuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAASAnyang, China; Department of Plant Sciences, College of Agronomy, Northwest A&F UniversityYangling, China.
Shuli FanState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Libei LiState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Hengling WeiState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Caixiang WangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Hantao WangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Meizhen SongState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Chi ZhangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Lijiao GuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Shuqi ZhaoState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Guangzhi MaoState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Chengshe WangDepartment of Plant Sciences, College of Agronomy, Northwest A&F University Yangling, China.
Chaoyou PangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS Anyang, China.
Shuxun YuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAASAnyang, China; Department of Plant Sciences, College of Agronomy, Northwest A&F UniversityYangling, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Improving cotton yield is a major breeding goal for Chinese upland cotton. Lint percentage is an important yield component and a critical economic index for cotton cultivars, and raising the lint percentage has a close relationship to improving cotton lint yield. To investigate the genetic architecture of lint percentage, a diversity panel consisting of 355 upland cotton accessions was grown, and the lint percentage was measured in four different environments. Genotyping was performed with specific-locus amplified fragment sequencing (SLAF-seq). Twelve single-nucleotide polymorphisms (SNPs) associated with lint percentage were detected via a genome-wide association study (GWAS), in which five SNP loci distributed on chromosomes A

Indexed as

candidate genesfavorable haplotypesgenome-wide association studylint percentageupland cotton

Identifiers

PMID27818672
PMCPMC5073211

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.