Evidence map›Paper›PMID 27816929›Full record

ArticleJournal of experimental botany2016

Wortmannin-induced vacuole fusion enhances amyloplast dynamics in Arabidopsis zigzag1 hypocotyls.

Ashley Ann Alvarez, Sang Won Han, Masatsugu Toyota, Carla Brillada, Jiameng Zheng, Simon Gilroy, Marcela Rojas-Pierce

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Gravity induces asymmetric CaPlant signaling & behavior · 2022
    Article
  6. Article
  7. Article
  8. Micromanipulation of amyloplasts with optical tweezers inPlant biotechnology (Tokyo, Japan) · 2020
    Article
  9. Article
  10. The Vacuolar Protein Sorting-38 Subunit of theFrontiers in plant science · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ashley Ann AlvarezDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA.
Sang Won HanDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA.
Masatsugu ToyotaJapan Science and Technology Agency (JST), Precursory Research for Embryonic Science and Technology (PRESTO), Saitama, Japan.
Carla BrilladaDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA.
Jiameng ZhengDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA.
Simon GilroyDepartment of Botany, University of Wisconsin, Madison, WI, USA.ORCID 0000-0001-9597-6839
Marcela Rojas-PierceDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA mrojasp@ncsu.edu.ORCID 0000-0003-1051-1827
North Carolina State University · USUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gravitropism in Arabidopsis shoots depends on the sedimentation of amyloplasts in the endodermis, and a complex interplay between the vacuole and F-actin. Gravity response is inhibited in zigzag-1 (zig-1), a mutant allele of VTI11, which encodes a SNARE protein involved in vacuole fusion. zig-1 seedlings have fragmented vacuoles that fuse after treatment with wortmannin, an inhibitor of phosphatidylinositol 3-kinase, and underscore a role of phosphoinositides in vacuole fusion. Using live-cell imaging with a vertical stage microscope, we determined that young endodermal cells below the apical hook that are smaller than 70 μm in length are the graviperceptive cells in dark-grown hypocotyls. This result was confirmed by local wortmannin application to the top of zig-1 hypocotyls, which enhanced shoot gravitropism in zig-1 mutants. Live-cell imaging of zig-1 hypocotyl endodermal cells indicated that amyloplasts are trapped between juxtaposed vacuoles and their movement is severely restricted. Wortmannin-induced fusion of vacuoles in zig-1 seedlings increased the formation of transvacuolar strands, enhanced amyloplast sedimentation and partially suppressed the agravitropic phenotype of zig-1 seedlings. Hypergravity conditions at 10 g were not sufficient to displace amyloplasts in zig-1, suggesting the existence of a physical tether between the vacuole and amyloplasts. Our results overall suggest that vacuole membrane remodeling may be involved in regulating the association of vacuoles and amyloplasts during graviperception.

Indexed as

AndrostadienesArabidopsisArabidopsis ProteinsGravitropismHypocotylMicroscopyQb-SNARE ProteinsVacuolesWortmanninAndrostadienesArabidopsis ProteinsQb-SNARE Proteinsvesicle transport v-SNARE 11 protein, ArabidopsisWortmanninAmyloplastscytoskeletongravitropismSNAREvacuolewortmannin.

Identifiers

PMID27816929
PMCPMC5181587
OpenAlexW2548176018

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.