Evidence map›Paper›PMID 27815502›Full record

ArticleThe Journal of biological chemistry2016

A Putative Cyclin-binding Motif in Human SAMHD1 Contributes to Protein Phosphorylation, Localization, and Stability.

Corine St Gelais, Sun Hee Kim, Lingmei Ding, Jacob S Yount, Dmitri Ivanov, Paul Spearman, Li Wu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Corine St GelaisFrom the Center of Retrovirus Research, Department of Veterinary Biosciences and.
Sun Hee KimFrom the Center of Retrovirus Research, Department of Veterinary Biosciences and.
Lingmei Dingthe Department of Pediatrics, Emory University, Atlanta, Georgia 30322.
Jacob S Yountthe Department of Microbial Infection and Immunity, Ohio State University, Columbus, Ohio 43210.
Dmitri Ivanovthe Department of Biochemistry, University of Texas Health Science Center, San Antonio, Texas 78229.
Paul Spearmanthe Department of Pediatrics, Emory University, Atlanta, Georgia 30322.
Li WuFrom the Center of Retrovirus Research, Department of Veterinary Biosciences and wu.840@osu.edu.
Emory University · USThe Ohio State University · USThe University of Texas Health Science Center at San Antonio · US

Funding

Retroviral capsid recognition by TRIM5alpha restriction factorsR01AI104476 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI IVANOV, DMITRI N · 2014 to 2018
$1.8M
Viral and Cellular Determinants of HIV-1 AssemblyR01GM111027 · NIGMS · EMORY UNIVERSITY · PI SPEARMAN, PAUL W. · 2013 to 2019
$1.7M
Mechanisms of SAMHD1-mediated HIV-1 restriction in dendritic cellsR01AI104483 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2013 to 2016
$1.5M
HIV-1 Nef Interaction with Nef-associated Factor 1 Regulates Viral LatencyR01AI120209 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2015 to 2017
$600k
Mechanisms of HIV-1 RNA Methylation in Regulating Viral ReplicationR56AI127667 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2016 to 2016
$400k
Novel role of SAMHD1 as a tumor suppressor in cutaneous T-cell lymphomasR21CA181997 · NCI · OHIO STATE UNIVERSITY · PI WU, LI · 2014 to 2015
$368k
NCI NIH HHS R21 CA181997NIAID NIH HHS R01 AI104476NIAID NIH HHS R01 AI104483NIAID NIH HHS R01 AI120209NIAID NIH HHS R56 AI127667NIGMS NIH HHS R01 GM111027
6 · The paper itself

Abstract

SAMHD1 (sterile α motif and HD domain-containing protein 1) is a mammalian protein that regulates intracellular dNTP levels through its hydrolysis of dNTPs. SAMHD1 functions as an important retroviral restriction factor through a mechanism relying on its dNTPase activity. We and others have reported that human SAMHD1 interacts with the cell cycle regulatory proteins cyclin A, CDK1, and CDK2, which mediates phosphorylation of SAMHD1 at threonine 592, a post-translational modification that has been implicated in abrogating SAMHD1 restriction function and ability to form stable tetramers. Utilizing co-immunoprecipitation and co-localization approaches, we show that endogenous SAMHD1 is able to interact with the cyclin A-CDK1-CDK2 complexin monocytic THP-1 cells and primary monocyte-derived macrophages. Sequence analysis of SAMHD1 identifies a putative cyclin-binding motif found in many cyclin-CDK complex substrates. Using a mutagenesis-based approach, we demonstrate that the conserved residues in the putative cyclin-binding motif are important for protein expression, protein half-life, and optimal phosphorylation of SAMHD1 at Thr

Indexed as

CDC2 Protein KinaseCell DivisionCell Line, TumorCyclin ACyclin-Dependent Kinase 2Cyclin-Dependent KinasesHumansMacrophagesMonocytesMonomeric GTP-Binding ProteinsPhosphorylationProtein Processing, Post-TranslationalSAM Domain and HD Domain-Containing Protein 1CDC2 Protein KinaseCDK1 protein, humanCDK2 protein, humanCyclin ACyclin-Dependent Kinase 2Cyclin-Dependent KinasesMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humanCDK1CDK2cyclincyclin-bindingcyclin-dependent kinase (CDK)phosphorylationprotein stabilitySAM domain and HD domain-containing protein 1 (SAMHD1)

Identifiers

PMID27815502
PMCPMC5159495
OpenAlexW2548329900

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.