Evidence map›Paper›PMID 27812878›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2017

Detection of Nucleotide Disbalance in Cells Undergoing Oncogene-Induced Senescence.

Mikhail A Nikiforov, Donna S Shewach

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 80% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Mikhail A NikiforovDepartment of Cell Stress Biology, Roswell Park Cancer Institute, BLSC L3-317, Elm & Carlton Streets, Buffalo, NY, 14263, USA. Mikhail.Nikiforov@Roswellpark.org.
Donna S ShewachDepartment of Pharmacology, University of Michigan, Ann Arbor, MI, 48109, USA.
Roswell Park Comprehensive Cancer Center · USUniversity of Michigan–Ann Arbor · US

Funding

Oncogene c-Myc-dependent pathways in cutaneous melanoma03R01CA120244 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI NIKIFOROV, MIKHAIL · 2007 to 2016
$3.3M
Mechanisms of Cytotoxicity and Radiosensitization for AntimetabolitesR01CA083081 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SHEWACH, DONNA S. · 1999 to 2014
$3.2M
KLF9-TXNRD2 axis in melanoma progression and metastasisR01CA190533 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI NIKIFOROV, MIKHAIL · 2015 to 2019
$2.0M
NCI NIH HHS R01 CA083081NCI NIH HHS R01 CA120244NCI NIH HHS R01 CA190533
6 · The paper itself

Abstract

DNA damage response has been characterized as an important mediator of senescence phenotypes induced by activated oncogenes in normal human cells. Depletion of intracellular deoxyribonucleotide pools has been recently recognized as one of the major causes for DNA damage in these cells. Cells undergoing oncogene-induced senescence display decreased expression of several rate-limiting enzymes involved in the biosynthesis of deoxyribonucleotides, including thymidylate synthase (TS) and ribonucleotide reductase (RR). Individual depletion of these enzymes leads to premature senescence. Reciprocally, ectopic expression of TS and RR or addition of deoxyribonucleosides resulted in suppression of senescence phenotypes in normal or tumor cells caused by overexpression of activated HRAS or depletion of C-MYC, respectively. Therefore, in the current chapter, we will describe a methodology for the quantitative measurement of nucleotide pools in senescent cells.

Indexed as

Cellular SenescenceOncogenesCell LineChromatography, High Pressure LiquidDeoxyribonucleotidesDNA DamageFibroblastsGene ExpressionGenes, mycHumansNucleotidesRibonucleotide ReductasesThymidylate SynthaseDeoxyribonucleotidesNucleotidesRibonucleotide ReductasesThymidylate SynthaseC-MYCDNA damageRibonucleotide reductase (RR)Thymidylate synthase (TS)

Identifiers

PMID27812878
PMCPMC5579839
OpenAlexW2547895704

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.