Evidence map›Paper›PMID 27811910›Full record

ArticleCell research2016

Codon optimality and mRNA decay.

Yuriko Harigaya, Roy Parker

Abstract readComment
In one paragraph

Article in Cell research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Genome-wide analysis of lncRNA stability in human.PLoS computational biology · 2021
    Article
  7. Article
  8. YeasTSS: an integrative web database of yeast transcription start sites.Database : the journal of biological databases and curation · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Yuriko HarigayaDepartment of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.
Roy ParkerDepartment of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent evidence indicates that codon optimality is a broad determinant of mRNA stability. A study by Radhakrishnan et al. in Cell raises the possibility that the conserved DEAD-box protein Dhh1 underlies the phenomenon.

Indexed as

ProteinsRNA StabilityCodonRNA, MessengerCodonProteinsRNA, Messenger

Identifiers

PMID27811910
PMCPMC5143416

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.