Evidence map›Paper›PMID 27811105›Full record

ArticleGenome announcements2016

Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds.

C Hwang, A Copeland, S Lucas, A Lapidus, K Barry, J C Detter, T Glavina Del Rio, N Hammon, S Israni, E Dalin and 16 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Genome Sequence of anMicrobiology resource announcements · 2021
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

C HwangCenter for Biofilm Engineering, Montana State University, Bozeman, Montana, USA chiachi.hwang@biofilm.montana.edu.
A CopelandDOE Joint Genome Institute, Walnut Creek, California, USA.
S LucasDOE Joint Genome Institute, Walnut Creek, California, USA.
A LapidusDOE Joint Genome Institute, Walnut Creek, California, USA.
K BarryDOE Joint Genome Institute, Walnut Creek, California, USA.
J C DetterDOE Joint Genome Institute, Walnut Creek, California, USA.
T Glavina Del RioDOE Joint Genome Institute, Walnut Creek, California, USA.
N HammonDOE Joint Genome Institute, Walnut Creek, California, USA.
S IsraniDOE Joint Genome Institute, Walnut Creek, California, USA.
E DalinDOE Joint Genome Institute, Walnut Creek, California, USA.
H TiceDOE Joint Genome Institute, Walnut Creek, California, USA.
S PitluckDOE Joint Genome Institute, Walnut Creek, California, USA.
O ChertkovDOE Joint Genome Institute, Walnut Creek, California, USA.
T BrettinDOE Joint Genome Institute, Walnut Creek, California, USA.
D BruceDOE Joint Genome Institute, Walnut Creek, California, USA.
C HanDOE Joint Genome Institute, Walnut Creek, California, USA.
J SchmutzDOE Joint Genome Institute, Walnut Creek, California, USA.
F LarimerDOE Joint Genome Institute, Walnut Creek, California, USA.
M L LandDOE Joint Genome Institute, Walnut Creek, California, USA.
L HauserDOE Joint Genome Institute, Walnut Creek, California, USA.
N KyrpidesDOE Joint Genome Institute, Walnut Creek, California, USA.
N MikhailovaDOE Joint Genome Institute, Walnut Creek, California, USA.
Q YeState Key Laboratory of Estuarine and Coastal Research, East China Normal University, Shanghai, China.
J ZhouUniversity of Oklahoma, Department of Microbiology and Plant Biology, Norman, Oklahoma, USA.
P RichardsonDOE Joint Genome Institute, Walnut Creek, California, USA.
M W FieldsDepartment of Microbiology and Immunology, Montana State University, Bozeman, Montana, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alkaliphilus metalliredigens strain QYMF is an anaerobic, alkaliphilic, and metal-reducing bacterium associated with phylum Firmicutes QYMF was isolated from alkaline borax leachate ponds. The genome sequence will help elucidate the role of metal-reducing microorganisms under alkaline environments, a capability that is not commonly observed in metal respiring-microorganisms.

Identifiers

PMID27811105
PMCPMC5095475

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.