Evidence map›Paper›PMID 27810943›Full record

ArticlePlant physiology2016

Methyl Transfer in Glucosinolate Biosynthesis Mediated by Indole Glucosinolate O-Methyltransferase 5.

Marina Pfalz, Maisara Mukhaimar, François Perreau, Jayne Kirk, Cecilie Ida Cetti Hansen, Carl Erik Olsen, Niels Agerbirk, Juergen Kroymann

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Glucosinolate O-methyltransferase mediated callus formation and affected ROS homeostasis inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Transcriptomic Analysis of Heat Stress Response inInternational journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Glucosinolates ofMolecules (Basel, Switzerland) · 2022
    Article
  17. Article
  18. Genome-wide association mapping within a localPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 5 countries.

Marina PfalzEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).
Maisara MukhaimarEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).ORCID 0000-0003-2388-9714
François PerreauEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).ORCID 0000-0001-7873-9866
Jayne KirkEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).
Cecilie Ida Cetti HansenEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).
Carl Erik OlsenEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).ORCID 0000-0002-2275-0596
Niels AgerbirkEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.).ORCID 0000-0003-4670-8330
Juergen KroymannEcologie Systématique Evolution, Centre National de la Recherche Scientifique/Université Paris-Sud/AgroParisTech, Université Paris-Saclay, 91400 Orsay, France (M.P., M.M., J.Kr.); juergen.kroymann@u-psud.fr.ORCID 0000-0002-4573-6498
Université Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Indole glucosinolates (IGs) are plant secondary metabolites that are derived from the amino acid tryptophan. The product of Arabidopsis (Arabidopsis thaliana) IG core biosynthesis, indol-3-ylmethyl glucosinolate (I3M), can be modified by hydroxylation and subsequent methoxylation of the indole ring in position 1 (1-IG modification) or 4 (4-IG modification). Products of the 4-IG modification pathway mediate plant-enemy interactions and are particularly important for Arabidopsis innate immunity. While CYP81Fs encoding cytochrome P450 monooxygenases and IGMTs encoding indole glucosinolate O-methyltransferases have been identified as key genes for IG modification, our knowledge about the IG modification pathways is not complete. In particular, it is unknown which enzyme is responsible for methyl transfer in the 1-IG modification pathway and whether this pathway plays a role in defense, similar to 4-IG modification. Here, we analyze two Arabidopsis transfer DNA insertion lines with targeted metabolomics. We show that biosynthesis of 1-methoxyindol-3-ylmethyl glucosinolate (1MOI3M) from I3M involves the predicted unstable intermediate 1-hydroxyindol-3-ylmethyl glucosinolate (1OHI3M) and that IGMT5, a gene with moderate similarity to previously characterized IGMTs, encodes the methyltransferase that is responsible for the conversion of 1OHI3M to 1MOI3M. Disruption of IGMT5 function increases resistance against the root-knot nematode Meloidogyne javanica and suggests a potential role for the 1-IG modification pathway in Arabidopsis belowground defense.

Indexed as

Biosynthetic PathwaysAnimalsArabidopsisArabidopsis ProteinsDisease ResistanceDNA, BacterialGene Expression Regulation, PlantGenes, PlantGlucosinolatesMass SpectrometryMetabolomeMethylationMethyltransferasesMutagenesis, InsertionalMutationPlant DiseasesArabidopsis ProteinsDNA, BacterialGlucosinolatesIGMT5 protein, Arabidpsisindole methyltransferaseMethyltransferasesT-DNA

Identifiers

PMID27810943
PMCPMC5129727
OpenAlexW2548659232

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.