Evidence map›Paper›PMID 27809385›Full record

ArticleAngewandte Chemie (International ed. in English)2016

In Vitro Selection of pH-Activated DNA Nanostructures.

Faye Yi Fong, Seung Soo Oh, Craig J Hawker, H Tom Soh

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. DNA Assembly-Based Stimuli-Responsive Systems.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  4. Interlocked DNA Nanojoints for Reversible Thermal Sensing.Angewandte Chemie (International ed. in English) · 2020
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Faye Yi FongMaterials Department, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA.
Seung Soo OhMaterials Department, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA.
Craig J HawkerDepartment of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA.
H Tom SohDepartment of Electrical Engineering and Department of Radiology, Canary Center at Stanford University, 3155 Porter Drive, Stanford, CA, 94305, USA.ORCID 0000-0001-9443-857X
University of California, Santa Barbara · USPohang University of Science and Technology · KRStanford Medicine · US

Funding

QPASS: Quantitative Parallel Aptamer Selection SystemU54DK093467 · NIDDK · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SMITH, LLOYD M, SOH, HYONGSOK TOM · 2011 to 2013
$3.2M
NIDDK NIH HHS U54 DK093467
6 · The paper itself

Abstract

We report the first in vitro selection of DNA nanostructures that switch their conformation when triggered by change in pH. Previously, most pH-active nanostructures were designed using known pH-active motifs, such as the i-motif or the triplex structure. In contrast, we performed de novo selections starting from a random library and generated nanostructures that can sequester and release Mipomersen, a clinically approved antisense DNA drug, in response to pH change. We demonstrate extraordinary pH-selectivity, releasing up to 714-fold more Mipomersen at pH 5.2 compared to pH 7.5. Interestingly, none of our nanostructures showed significant sequence similarity to known pH-sensitive motifs, suggesting that they may operate via novel structure-switching mechanisms. We believe our selection scheme is general and could be adopted for generating DNA nanostructures for many applications including drug delivery, sensors and pH-active surfaces.

Indexed as

DNAHydrogen-Ion ConcentrationNanostructuresDNAcontrolled releaseDNA structuresin vitro selectionnanostructurespH-responsivity

Identifiers

PMID27809385
PMCPMC5392411
OpenAlexW2548115428

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.