Evidence map›Paper›PMID 27808255›Full record

ArticleScientific reports2016

How many papillomavirus species can go undetected in papilloma lesions?

Cíntia Daudt, Flavio R C da Silva, André F Streck, Matheus N Weber, Fabiana Q Mayer, Samuel P Cibulski, Cláudio W Canal

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Gene expression, viral load, and bovine papillomavirus coinfection in blood and cutaneous warts of cattle.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  2. Bovine and ovine deltapapillomavirus coinfection associated with equine sarcoid.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  3. Article
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  5. Article
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  8. Characterization of Three Novel Papillomavirus Genomes in Vampire Bats (Animals : an open access journal from MDPI · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Cutaneous papilloma associated with a novel papillomavirus sequence in a cat.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in veterinary science · 2021
    Review
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Cíntia DaudtLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).
Flavio R C da SilvaLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).
André F StreckLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).
Matheus N WeberLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).
Fabiana Q MayerLaboratório de Biologia Molecular, Instituto de Pesquisas Veterinárias Desidério Finamor (IPVDF), Fundação Estadual de Pesquisa Agropecuária (Estrada do Conde, 6000, CEP 92990-000, Eldorado do Sul, Rio Grande do Sul, Brazil).
Samuel P CibulskiLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).
Cláudio W CanalLaboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (Av. Bento Gonçalves, 9090, Prédio 42.602, CEP 91540-000, Porto Alegre, Brazil).

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A co-infection comprising to at least seven papillomavirus (PV) types was detected by next generation sequencing (NGS) of randomly primed rolling circle amplification (RCA) products of a bovine (Bos taurus) papilloma lesion from the Brazilian Amazon region. Six putative new PV types that could not be detected by commonly used PCR protocols were identified. Their overall L1 nucleotide identities were less than 90% compared to described PV species and types. L1 nucleotide BLAST sequence hits showed that each new type was related to Beta, Gamma, Dyokappa, Dyoeta, and Xipapillomavirus, as well as two likely new unclassified genera. Our results show that the employment of NGS is relevant to the detection and characterization of distantly related PV and is of major importance in co-infection studies. This knowledge will help us understand the biology and pathogenesis of PV, as well as contribute to disease control. Moreover, we can also conclude that there are many unknown circulating PVs.

Indexed as

AnimalsBase SequenceCattleCoinfectionDNA, ViralGenome, ViralHigh-Throughput Nucleotide SequencingNucleic Acid Amplification TechniquesOpen Reading FramesPapillomaPapillomaviridaePhylogenyPolymerase Chain ReactionSequence Analysis, DNADNA, Viral

Identifiers

PMID27808255
PMCPMC5093584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.