Evidence map›Paper›PMID 27807928›Full record

ArticleCytometry. Part B, Clinical cytometry2017

Multiparameter Single Cell Profiling of Airway Inflammatory Cells.

Yi Yao, Tobias Welp, Qing Liu, Naiqian Niu, Xiaomei Wang, Clemente J Britto, Smita Krishnaswamy, Geoffrey L Chupp, Ruth R Montgomery

Abstract read
In one paragraph

Article in Cytometry. Part B, Clinical cytometry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Bronchial Epithelial Cell CC16 mRNA: Novel Asthma Biomarker or the Same Book with a New Cover?American journal of respiratory and critical care medicine · 2023
    Article
  4. Review
  5. Article
  6. SPLUNC1: a novel marker of cystic fibrosis exacerbations.The European respiratory journal · 2021
    Article
  7. Article
  8. Maternal obesity is associated with phenotypic alterations in fetal immune cells by single-cell mass cytometry.American journal of reproductive immunology (New York, N.Y. : 1989) · 2021
    Article
  9. Single-Cell Transcriptional Archetypes of Airway Inflammation in Cystic Fibrosis.American journal of respiratory and critical care medicine · 2020
    Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yi YaoDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Tobias WelpDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.
Qing LiuDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Naiqian NiuDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Xiaomei WangDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Clemente J BrittoDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Smita KrishnaswamyDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut.
Geoffrey L ChuppDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.
Ruth R MontgomeryDepartment of Internal Medicine, Yale University School of Medicine, New Haven, Connecticut.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Longitudinal Analysis of Transcriptomic Endophenotypes in AsthmaR01HL118346 · NHLBI · YALE UNIVERSITY · PI CHUPP, GEOFFREY L · 2013 to 2016
$3.3M
Gene Expression Profiling in Asthma Severity: CHI3L1 Genotypes and Serum YKL-40R01HL095390 · NHLBI · YALE UNIVERSITY · PI CHUPP, GEOFFREY L · 2008 to 2011
$3.2M
SPLUNC1 and Neutrophilic Inflammation in Cystic FibrosisK01HL125514 · NHLBI · YALE UNIVERSITY · PI BRITTO-LEON, CLEMENTE · 2015 to 2021
$905k
Sputum-Based Profiling to Predict Cystic Fibrosis ExacerbationsR03HL154276 · NHLBI · YALE UNIVERSITY · PI BRITTO-LEON, CLEMENTE · 2020 to 2021
$168k
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS K01 HL125514NHLBI NIH HHS R01 HL095390NHLBI NIH HHS R01 HL118346NHLBI NIH HHS R03 HL154276NIAID NIH HHS HHSN272201100019CNIAID NIH HHS HHSN272201100019I
6 · The paper itself

Abstract

Airway diseases affect over 7% of the U.S. population and millions of patients worldwide. Asthmatic patients have wide variation in clinical severity with different clinical and physiologic manifestations of disease that may be driven by distinct biologic mechanisms. Further, the immunologic underpinnings of this complex trait disease are heterogeneous and treatment success depends on defining subgroups of asthmatics. Because of the limited availability and number of cells from the lung, the active site, in-depth investigation has been challenging. Recent advances in technology support transcriptional analysis of cells from induced sputum. Flow cytometry studies have described cells present in the sputum but a detailed analysis of these subsets is lacking. Mass cytometry or CyTOF (Cytometry by Time-Of-Flight) offers tremendous opportunities for multiparameter single cell analysis. Experiments can now allow detection of up to ∼40 markers to facilitate unprecedented multidimensional cellular analyses. Here we demonstrate the use of CyTOF on primary airway samples obtained from well-characterized patients with asthma and cystic fibrosis. Using this technology, we quantify cellular frequency and functional status of defined cell subsets. Our studies provide a blueprint to define the heterogeneity among subjects and underscore the power of this single cell method to characterize airway immune status. © 2016 International Clinical Cytometry Society.

Indexed as

Flow CytometryAdolescentAdultAsthmaBiomarkersEosinophilsFemaleHumansLeukocyte CountMaleMiddle AgedNeutrophilsRespiratory SystemSputumYoung AdultBiomarkersasthmacystic fibrosisCyTOFeosinophilimmune responselung diseasemass cytometryneutrophilssputum

Identifiers

PMID27807928
PMCPMC5250532

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.