Evidence map›Paper›PMID 27807834›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2017

CRISPR/Cas-Mediated Knockin in Human Pluripotent Stem Cells.

Nipun Verma, Zengrong Zhu, Danwei Huangfu

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. CRISPR Gene Tagging for Illuminating Endogenous Protein Dynamics.International journal of molecular sciences · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nipun VermaDevelopmental Biology Program, Sloan Kettering Institute, 1275 York Avenue, New York, NY, 10065, USA.
Zengrong ZhuDevelopmental Biology Program, Sloan Kettering Institute, 1275 York Avenue, New York, NY, 10065, USA.
Danwei HuangfuDevelopmental Biology Program, Sloan Kettering Institute, 1275 York Avenue, New York, NY, 10065, USA. huangfud@mskcc.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Understanding Pancreatic Progenitors for Diabetes Cell-Replacement TherapyR01DK096239 · NIDDK · SLOAN-KETTERING INST CAN RESEARCH · PI HUANGFU, DANWEI · 2012 to 2021
$4.4M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA008748NIDDK NIH HHS R01 DK096239
6 · The paper itself

Abstract

Fluorescent reporter and epitope-tagged human pluripotent stem cells (hPSCs) greatly facilitate studies on the pluripotency and differentiation characteristics of these cells. Unfortunately traditional procedures to generate such lines are hampered by a low targeting efficiency that necessitates a lengthy process of selection followed by the removal of the selection cassette. Here we describe a procedure to generate fluorescent reporter and epitope tagged hPSCs in an efficient one-step process using the CRISPR/Cas technology. Although the method described uses our recently developed iCRISPR platform, the protocols can be adapted for general use with CRISPR/Cas or other engineered nucleases. The transfection procedures described could also be used for additional applications, such as overexpression or lineage tracing studies.

Indexed as

CRISPR-Cas SystemsGene Knock-In TechniquesBacterial ProteinsClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Associated Protein 9DoxycyclineEndonucleasesEpitopesGenes, ReporterGenetic LociGenetic VectorsGreen Fluorescent ProteinsHomologous RecombinationHumansLipidsLuminescent ProteinsBacterial ProteinsCas9 endonuclease Streptococcus pyogenesCRISPR-Associated Protein 9DoxycyclineEndonucleasesEpitopesfluorescent protein 583Green Fluorescent ProteinsLipidsLipofectamineLuminescent ProteinsRNA, Guide, CRISPR-Cas SystemsCRISPR/CasEpitope tagFluorescent reporterGene targetingHomologous recombinationHuman pluripotent stem cells (hPSCs)Knockin

Identifiers

PMID27807834
PMCPMC5554709

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.