Evidence map›Paper›PMID 27807470›Full record

ArticleThe annals of applied statistics2016

A BAYESIAN HIERARCHICAL SPATIAL MODEL FOR DENTAL CARIES ASSESSMENT USING NON-GAUSSIAN MARKOV RANDOM FIELDS.

Ick Hoon Jin, Ying Yuan, Dipankar Bandyopadhyay

Open access · greenAbstract read
In one paragraph

Article in The annals of applied statistics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ick Hoon JinUniversity of Notre Dame.
Ying YuanUniversity of Texas.
Dipankar BandyopadhyayVirginia Commonwealth University.
Virginia Commonwealth University · USUniversity of Notre Dame · US

Funding

Supplement: Spatiotemporal models for periodontal disease monitoring and recall frequenciesR01DE024984 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI BANDYOPADHYAY, DIPANKAR, REICH, BRIAN J. · 2015 to 2017
$1.2M
Bayesian Adaptive Designs for Oncology Clinical Trials with Late-onset OutcomesR01CA154591 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI YUAN, YING · 2011 to 2014
$1.2M
Robust spatial models for clustered periodontal dataR03DE021762 · NIDCR · UNIVERSITY OF MINNESOTA · PI BANDYOPADHYAY, DIPANKAR, REICH, BRIAN J. · 2011 to 2012
$305k
Robust nonparametric methods with variable selection for clustered dental dataR03DE020114 · NIDCR · UNIVERSITY OF MINNESOTA · PI BANDYOPADHYAY, DIPANKAR, CAI, BO · 2010 to 2011
$299k
NCI NIH HHS R01 CA154591NIDCR NIH HHS R01 DE024984NIDCR NIH HHS R03 DE020114NIDCR NIH HHS R03 DE021762
6 · The paper itself

Abstract

Research in dental caries generates data with two levels of hierarchy: that of a tooth overall and that of the different surfaces of the tooth. The outcomes often exhibit spatial referencing among neighboring teeth and surfaces, i.e., the disease status of a tooth or surface might be influenced by the status of a set of proximal teeth/surfaces. Assessments of dental caries (tooth decay) at the tooth level yield binary outcomes indicating the presence/absence of teeth, and trinary outcomes at the surface level indicating healthy, decayed, or filled surfaces. The presence of these mixed discrete responses complicates the data analysis under a unified framework. To mitigate complications, we develop a Bayesian two-level hierarchical model under suitable (spatial) Markov random field assumptions that accommodates the natural hierarchy within the mixed responses. At the first level, we utilize an autologistic model to accommodate the spatial dependence for the tooth-level binary outcomes. For the second level and conditioned on a tooth being non-missing, we utilize a Potts model to accommodate the spatial referencing for the surface-level trinary outcomes. The regression models at both levels were controlled for plausible covariates (risk factors) of caries, and remain connected through shared parameters. To tackle the computational challenges in our Bayesian estimation scheme caused due to the doubly-intractable normalizing constant, we employ a double Metropolis-Hastings sampler. We compare and contrast our model performances to the standard non-spatial (naive) model using a small simulation study, and illustrate via an application to a clinical dataset on dental caries.

Indexed as

Autologistic ModelBayesian InferenceDental CariesMarkov Chain Monte CarloPotts ModelSpatial Data Analysis

Identifiers

PMID27807470
PMCPMC5087817
OpenAlexW2504020175

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.