Evidence map›Paper›PMID 27807341›Full record

ArticleNature communications2016

T cell receptor recognition of CD1b presenting a mycobacterial glycolipid.

Stephanie Gras, Ildiko Van Rhijn, Adam Shahine, Tan-Yun Cheng, Mugdha Bhati, Li Lynn Tan, Hanim Halim, Kathryn D Tuttle, Laurent Gapin, Jérôme Le Nours and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 67 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Metabolic control of innate-like T cells.Nature reviews. Immunology · 2026
    Review
  5. Article
  6. Sideways lipid presentation by the antigen-presenting molecule CD1c.bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Sensing mycobacteria through unconventional pathways.The Journal of clinical investigation · 2025
    Article
  9. Article
  10. Article
  11. Lipidomic scanning of self-lipids identifies headless antigens for natural killer T cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Unconventional T cells and kidney disease.Nature reviews. Nephrology · 2021
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Stephanie GrasInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Ildiko Van RhijnDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.ORCID 0000-0002-1446-5701
Adam ShahineInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Tan-Yun ChengDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Mugdha BhatiInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Li Lynn TanInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Hanim HalimInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Kathryn D TuttleDepartment of Immunology and Microbiology, University of Colorado Anschutz Medical Campus and National Jewish Health, Aurora, Colorado, USA.
Laurent GapinDepartment of Immunology and Microbiology, University of Colorado Anschutz Medical Campus and National Jewish Health, Aurora, Colorado, USA.
Jérôme Le NoursInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
D Branch MoodyDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jamie RossjohnInfection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.
Australian Research Council · AUAustralian Regenerative Medicine Institute · AUBrigham and Women's Hospital · USNational Jewish Health · US

Funding

Metabolomics Core U19AI111224 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI MURRAY, MEGAN B, RAYCHAUDHURI, SOUMYA · 2015 to 2021
$20.4M
T cell response to CDI-restricted lipids in tuberculosisR01AI049313 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI MOODY, DAVID BRANCH · 2001 to 2025
$10.6M
Role of Rapid IFNg Secretion by CD*+ T cells in Clearance of Food Borne ListeriaR01AI101373 · NIAID · UNIVERSITY OF KENTUCKY · PI D'ORAZIO, SARAH E. F. · 2012 to 2015
$1.5M
Inherent reactivity of T cell antigen receptors for MHC moleculesR21AI121761 · NIAID · UNIVERSITY OF COLORADO DENVER · PI GAPIN, LAURENT · 2016 to 2017
$421k
NIAID NIH HHS R01 AI049313NIAID NIH HHS R01 AI101373NIAID NIH HHS R21 AI121761NIAID NIH HHS U19 AI111224
6 · The paper itself

Abstract

CD1 proteins present microbial lipids to T cells. Germline-encoded mycolyl lipid-reactive (GEM) T cells with conserved αβ T cell receptors (TCRs) recognize CD1b presenting mycobacterial mycolates. As the molecular basis underpinning TCR recognition of CD1b remains unknown, here we determine the structure of a GEM TCR bound to CD1b presenting glucose-6-O-monomycolate (GMM). The GEM TCR docks centrally above CD1b, whereby the conserved TCR α-chain extensively contacts CD1b and GMM. Through mutagenesis and study of T cells from tuberculosis patients, we identify a consensus CD1b footprint of TCRs present among GEM T cells. Using both the TCR α- and β-chains as tweezers to surround and grip the glucose moiety of GMM, GEM TCRs create a highly specific mechanism for recognizing this mycobacterial glycolipid.

Indexed as

Antigens, CD1GlycolipidsHistocompatibility Antigens Class IHumansLatent TuberculosisMinor Histocompatibility AntigensMycobacterium phleiProtein ConformationReceptors, Antigen, T-CellRhodococcus equiT-LymphocytesAntigens, CD1CD1b antigenglucose mycolateGlycolipidsHistocompatibility Antigens Class IMinor Histocompatibility AntigensMR1 protein, humanReceptors, Antigen, T-Cell

Identifiers

PMID27807341
PMCPMC5095289
OpenAlexW2540587223

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.