Evidence map›Paper›PMID 27807232›Full record

ArticleJournal of virology2017

Structure of the Open Reading Frame 49 Protein Encoded by Kaposi's Sarcoma-Associated Herpesvirus.

Kelly Hew, Saranya Veerappan, Daniel Sim, Tobias Cornvik, Pär Nordlund, Sue-Li Dahlroth

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Kelly HewDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore.
Saranya VeerappanDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore.
Daniel SimDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore.
Tobias CornvikDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore.
Pär NordlundDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore par.nordlund@ki.se sdahlroth@ntu.edu.sg.
Sue-Li DahlrothDivision of Structural Biology and Biochemistry, Nanyang Technological University, School of Biological Sciences, Singapore par.nordlund@ki.se sdahlroth@ntu.edu.sg.
Nanyang Technological University · SGInstitute of Molecular and Cell Biology · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Herpesviruses alternate between the latent and the lytic life cycle. Switching into the lytic life cycle is important for herpesviral replication and disease pathogenesis. Activation of a transcription factor replication and transcription activator (RTA) has been demonstrated to govern this switch in Kaposi's sarcoma-associated herpesvirus (KSHV). The protein encoded by open reading frame 49 from KSHV (ORF49 IMPORTANCE: Kaposi's sarcoma-associated herpesvirus (KSHV) is a tumorigenic gammaherpesvirus that causes multiple cancers and lymphoproliferative diseases. The virus exists mainly in the quiescent latent life cycle, but when it is reactivated into the lytic life cycle, new viruses are produced and disease symptoms usually manifest. Several KSHV proteins play important roles in this reactivation, but their exact roles are still largely unknown. In this study, we report the crystal structure of the open reading frame 49 protein encoded by KSHV (ORF49

Indexed as

Gene Expression Regulation, ViralModels, MolecularMolecular ConformationOpen Reading FramesAmino Acid SequenceConserved SequenceDNA-Binding ProteinsEvolution, MolecularHerpesvirus 8, HumanHumansHydrophobic and Hydrophilic InteractionsPromoter Regions, GeneticStatic ElectricityThermodynamicsTranscription Initiation SiteViral ProteinsDNA-Binding ProteinsViral ProteinsHerpesvirusKaposi's sarcoma-associated herpesvirusKSHVORF49structural biology

Identifiers

PMID27807232
PMCPMC5215346
OpenAlexW2548576515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.