Evidence map›Paper›PMID 27806714›Full record

ArticleBMC medicine2016

The emerging threat of pre-extensively drug-resistant tuberculosis in West Africa: preparing for large-scale tuberculosis research and drug resistance surveillance.

Florian Gehre, Jacob Otu, Lindsay Kendall, Audrey Forson, Awewura Kwara, Samuel Kudzawu, Aderemi O Kehinde, Oludele Adebiyi, Kayode Salako, Ignatius Baldeh and 34 more

Open access · goldAbstract read
In one paragraph

Article in BMC medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 3 pooled it
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 3 syntheses or guidelines pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Understanding the gaps in DR-TB care cascade in Nigeria: A sequential mixed-method study.Journal of clinical tuberculosis and other mycobacterial diseases · 2020
    Article
  16. Institutional Approaches to Research Integrity in Ghana.Science and engineering ethics · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 16 institutions in 11 countries.

Florian GehreVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Jacob OtuVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Lindsay KendallVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Audrey ForsonUniversity of Ghana Medical School, Accra, Ghana.
Awewura KwaraWarren Alpert Medical School of Brown University, Providence, RI, USA.
Samuel KudzawuKorle-Bu Teaching Hospital, Accra, Ghana.
Aderemi O KehindeCollege of Medicine, University of Ibadan, Ibadan, Nigeria.
Oludele AdebiyiUniversity College Hospital, Ibadan, Oyo, 23402, Nigeria.
Kayode SalakoUniversity College Hospital, Ibadan, Oyo, 23402, Nigeria.
Ignatius BaldehNational Public Health Laboratory Services, Banjul, The Gambia.
Aisha JallowNational Public Health Laboratory Services, Banjul, The Gambia.
Mamadou JallowNational Public Health Laboratory Services, Banjul, The Gambia.
Anoumou DagnraLaboratoire National de Reference Mycobacteria, Lome, Togo.
Kodjo DisséLaboratoire National de Reference Mycobacteria, Lome, Togo.
Essosimna A KadangaLaboratoire National de Reference Mycobacteria, Lome, Togo.
Emmanuel Oni IdigbeNigerian Institute of Medical Research, Lagos, Nigeria.
Catherine OnuboguNigerian Institute of Medical Research, Lagos, Nigeria.
Nneka OnyejepuNigerian Institute of Medical Research, Lagos, Nigeria.
Aissatou Gaye-DialloLaboratoire Bactériologie Virologie Aristide Le Dantec Sénégal, Dakar, Senegal.
Awa Ba-DialloLaboratoire Bactériologie Virologie Aristide Le Dantec Sénégal, Dakar, Senegal.
Paulo RabnaNational Institute of Public Health, Bissau, Guinea-Bissau.
Morto ManeNational Institute of Public Health, Bissau, Guinea-Bissau.
Moumine SanogoSEREFO Program, University of Sciences, Techniques and Technologies of Bamako, Bamako, Mali.
Bassirou DiarraSEREFO Program, University of Sciences, Techniques and Technologies of Bamako, Bamako, Mali.
Zingue DezemonCentre Muraz and the National TB Program, Ouagadougou, Burkina Faso.
Adama SanouCentre Muraz and the National TB Program, Ouagadougou, Burkina Faso.
Madikay SenghoreVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Brenda A Kwambana-AdamsVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Edward DembaVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Tutty Faal-JawaraVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Samrat KumarInstitute of Tropical Medicine, Antwerp, Belgium.
Leopold D TientcheuVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Adama JallowNational Tuberculosis/Leprosy Control Program, Banjul, The Gambia.
Samba CeesayHealth Services, Ministry of Health and Social Welfare, Banjul, The Gambia.
Ifedayo AdetifaDepartment of Infectious Diseases Epidemiology, London School of Hygiene and Tropical Medicine, London, UK.
Assan JayeVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Mark J PallenMicrobiology and Infection Unit, Warwick Medical School, University of Warwick, Coventry, UK.
Umberto D'AlessandroFaculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK.
Beate KampmannVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Richard A AdegbolaGSK Vaccines, Wavre, Belgium.
Souleymane MboupLaboratoire Bactériologie Virologie Aristide Le Dantec Sénégal, Dakar, Senegal.
Tumani CorrahVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia.
Bouke C de JongInstitute of Tropical Medicine, Antwerp, Belgium.
Martin AntonioVaccines and Immunity Theme, Medical Research Council Unit The Gambia, Banjul, The Gambia. mantonio@mrc.gm.
MRC Unit the Gambia · GMHôpital Aristide Le Dantec · SNLondon School of Hygiene & Tropical Medicine · GBNigerian Institute of Medical Research · NGCentre Muraz · BFInstituut voor Tropische Geneeskunde · BEKorle Bu Teaching Hospital · GHNational Institute of Public Health · GWUniversité des Sciences, des Techniques et des Technologies de Bamako · MLUniversity College Hospital, Ibadan · NGUniversity of Warwick · GBGlaxoSmithKline (Belgium) · BEImperial College London · GBMinistry of Health and Social Welfare · GMProvidence College · USUniversity of Ibadan · NG

Funding

Medical Research Council MC_EX_MR/J010391/1Medical Research Council MC_EX_MR/K011944/1Medical Research Council MC_U190074190Medical Research Council MC_U190081991Medical Research Council MC_UP_A900_1122
6 · The paper itself

Abstract

backgroundDrug-resistant tuberculosis (TB) is a global public health problem. Adequate management requires baseline drug-resistance prevalence data. In West Africa, due to a poor laboratory infrastructure and inadequate capacity, such data are scarce. Therefore, the true extent of drug-resistant TB was hitherto undetermined. In 2008, a new research network, the West African Network of Excellence for Tuberculosis, AIDS and Malaria (WANETAM), was founded, comprising nine study sites from eight West African countries (Burkina Faso, The Gambia, Ghana, Guinea-Bissau, Mali, Nigeria, Senegal and Togo). The goal was to establish Good Clinical Laboratory Practice (GCLP) principles and build capacity in standardised smear microscopy and mycobacterial culture across partnering laboratories to generate the first comprehensive West African drug-resistance data.

methodsFollowing GCLP and laboratory training sessions, TB isolates were collected at sentinel referral sites between 2009-2013 and tested for first- and second-line drug resistance.

resultsFrom the analysis of 974 isolates, an unexpectedly high prevalence of multi-drug-resistant (MDR) strains was found in new (6 %) and retreatment patients (35 %) across all sentinel sites, with the highest prevalence amongst retreatment patients in Bamako, Mali (59 %) and the two Nigerian sites in Ibadan and Lagos (39 % and 66 %). In Lagos, MDR is already spreading actively amongst 32 % of new patients. Pre-extensively drug-resistant (pre-XDR) isolates are present in all sites, with Ghana showing the highest proportion (35 % of MDR). In Ghana and Togo, pre-XDR isolates are circulating amongst new patients.

conclusionsWest African drug-resistance prevalence poses a previously underestimated, yet serious public health threat, and our estimates obtained differ significantly from previous World Health Organisation (WHO) estimates. Therefore, our data are reshaping current concepts and are essential in informing WHO and public health strategists to implement urgently needed surveillance and control interventions in West Africa.

Indexed as

Practice Guidelines as TopicAdultAfrica, WesternAntitubercular AgentsExtensively Drug-Resistant TuberculosisFemaleHumansMaleMycobacterium tuberculosisPrevalenceWorld Health OrganizationAntitubercular AgentsCapacity buildingDrug-resistance surveillanceExtensively drug-resistant tuberculosisTuberculosisWest Africa

Identifiers

PMID27806714
PMCPMC5094099
OpenAlexW2532543970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.