Evidence map›Paper›PMID 27806667›Full record

ArticleThe journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians2017

Genetic variations related to maternal whole blood mitochondrial DNA copy number: a genome-wide and candidate gene study.

Tsegaselassie Workalemahu, Daniel A Enquobahrie, Mahlet G Tadesse, Karin Hevner, Bizu Gelaye, Sixto E Sanchez, Michelle A Williams

Open access · greenAbstract read
In one paragraph

Article in The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Tsegaselassie Workalemahua Department of Epidemiology, School of Public Health, University of Washington , Seattle, WA , USA.
Daniel A Enquobahriea Department of Epidemiology, School of Public Health, University of Washington , Seattle, WA , USA.
Mahlet G Tadessec Department of Mathematics and Statistics, Georgetown University , Washington, DC , USA.
Karin Hevnerb Center for Perinatal Studies, Swedish Medical Center , Seattle, WA , USA.
Bizu Gelayed Department of Epidemiology, Harvard T.H. Chan School of Public Health , Boston, MA , USA.
Sixto E Sancheze Asociación Civil PROESA, Lima, Peru; Universidad Peruana de Ciencias Aplicados , Lima , Peru.
Michelle A Williamsd Department of Epidemiology, Harvard T.H. Chan School of Public Health , Boston, MA , USA.
Harvard University · USSwedish Medical Center · USGeorgetown University · USPeruvian University of Applied Sciences · PEUniversity of Washington · US

Funding

Triggers of Abruptio Placentae - A Case Crossover Study of an Ischemic PlacentalR01HD059827 · NICHD · SWEDISH MEDICAL CENTER, FIRST HILL · PI ANANTH, CANDE V., WILLIAMS, MICHELLE A. · 2010 to 2014
$2.7M
University of Washington Reproductive, Perinatal and Pediatric Epidemiology T32HD052462 · NICHD · UNIVERSITY OF WASHINGTON · PI HOLT, VICTORIA L · 2006 to 2017
$2.7M
Vitamin D related genes and developmental origins of cardiometabolic riskK01HL103174 · NHLBI · UNIVERSITY OF WASHINGTON · PI ENQUOBAHRIE, DANIEL ASMAMAW · 2010 to 2014
$661k
MICROPHYSIOMETRY OF NEW BUFADIENOLIDE GLYCOSIDESF32HL010374 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ABRELL, LEIF M · 2000 to 2001
$80k
NHLBI NIH HHS F32 HL010374NHLBI NIH HHS K01 HL103174NICHD NIH HHS R01 HD059827NICHD NIH HHS T32 HD052462
6 · The paper itself

Abstract

We conducted genome-wide (GWAS) and candidate gene association studies of maternal mitochondrial DNA copy number. Maternal peripheral blood was collected during labor and delivery admission from 471 participants of a placental abruption case-control study conducted in Lima, Peru. Single nucleotide polymorphism (SNP) genotyping was performed using the Illumina Cardio-Metabo Chip. Whole blood mitochondrial DNA (mtDNA) copy number was measured using qRT-PCR techniques. We evaluated 119,629 SNPs in the GWAS and 161 SNPs (in 29 mitochondrial biogenesis and oxidative phosphorylation genes) in the candidate association study. Top hits from GWAS and the candidate gene study were selected to compute weighted genetic risk scores (wGRS). Linear regression models were used to calculate effect size estimates and related nominal p values. The top hit in our GWAS was chr19:51063065 in FOXA3 (empirical p values = 2.20e - 6). A total of 134 SNPs had p values < 0.001 including rs17111633 in CNNM1 (p values = 6.32e - 6) and chr19:51083059 in MYPOP (p values = 3.23e - 5). In the candidate association study, several SNPs in PPARG, PRKCA, SP1 and THRB were associated with mtDNA copy number (p values < 0.05). mtDNA copy number was significantly associated with wGRS based on top GWAS hits (β = 0.49, 95% CI:0.38-0.60, p < 0.001). Variations in nuclear DNA are potentially associated with maternal mtDNA copy number.

Indexed as

DNA Copy Number VariationsDNA, MitochondrialAbruptio PlacentaeAdultCase-Control StudiesFemaleGenome-Wide Association StudyHumansPregnancyYoung AdultDNA, Mitochondrialgenetic variationMaternal mitochondrial DNA copy numbermitochondrial biogenesisoxidative phosphorylationpregnancy

Identifiers

PMID27806667
PMCPMC5681349
OpenAlexW2548871584

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.