Evidence map›Paper›PMID 27806375›Full record

ArticleNature2016

Developmental mechanisms of stripe patterns in rodents.

Ricardo Mallarino, Corneliu Henegar, Mercedes Mirasierra, Marie Manceau, Carsten Schradin, Mario Vallejo, Slobodan Beronja, Gregory S Barsh, Hopi E Hoekstra

Open access · greenAbstract read
In one paragraph

Article in Nature, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 136 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Differential Expression ofAnimals : an open access journal from MDPI · 2026
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  5. Article
  6. Article
  7. Article
  8. Review
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  10. Colony pattern multistability emerges from a bistable switch.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Development shapes the evolutionary diversification of rodent stripe patterns.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Ricardo MallarinoHoward Hughes Medical Institute, Departments of Organismic &Evolutionary Biology and Molecular &Cellular Biology, Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts 02138, USA.
Corneliu HenegarHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Mercedes MirasierraInstituto de Investigaciones Biomédicas Alberto Sols (CSIC/UAM) and Ciber de Diabetes y Enfermedades Metabólicas Asociadas (Ciberdem), Madrid 28029, Spain.
Marie ManceauCenter for Interdisciplinary Research in Biology, Collège de France, Paris 75005, France.
Carsten SchradinUniversité de Strasbourg, CNRS, IPHC UMR 7178, F-67000 Strasbourg, France.
Mario VallejoInstituto de Investigaciones Biomédicas Alberto Sols (CSIC/UAM) and Ciber de Diabetes y Enfermedades Metabólicas Asociadas (Ciberdem), Madrid 28029, Spain.
Slobodan BeronjaFred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Gregory S BarshHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Hopi E HoekstraHoward Hughes Medical Institute, Departments of Organismic &Evolutionary Biology and Molecular &Cellular Biology, Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts 02138, USA.
Harvard University Press · USStanford Medicine · USCentre Interdisciplinaire de Recherche en Biologie · FRCentre National de la Recherche Scientifique · FRFred Hutch Cancer Center · US

Funding

Melanocortin signaling: genetic insight from X-linked color mutations in non-model organismsR01AR067925 · NIAMS · HUDSON-ALPHA INSTITUTE FOR BIOTECHNOLOGY · PI BARSH, GREGORY STEFAN · 2015 to 2019
$1.6M
Mechanisms of epidermal growth during development, homeostasis, and tumorigenesisR00AR061469 · NIAMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BERONJA, SLOBODAN · 2013 to 2015
$720k
NIAMS NIH HHS R01 AR067925
6 · The paper itself

Abstract

Mammalian colour patterns are among the most recognizable characteristics found in nature and can have a profound impact on fitness. However, little is known about the mechanisms underlying the formation and subsequent evolution of these patterns. Here we show that, in the African striped mouse (Rhabdomys pumilio), periodic dorsal stripes result from underlying differences in melanocyte maturation, which give rise to spatial variation in hair colour. We identify the transcription factor ALX3 as a regulator of this process. In embryonic dorsal skin, patterned expression of Alx3 precedes pigment stripes and acts to directly repress Mitf, a master regulator of melanocyte differentiation, thereby giving rise to light-coloured hair. Moreover, Alx3 is upregulated in the light stripes of chipmunks, which have independently evolved a similar dorsal pattern. Our results show a previously undescribed mechanism for modulating spatial variation in hair colour and provide insights into how phenotypic novelty evolves.

Indexed as

Body PatterningGene Expression Regulation, DevelopmentalHair ColorAnimalsBiological EvolutionCell DifferentiationHomeodomain ProteinsMelaninsMelanocytesMiceMicrophthalmia-Associated Transcription FactorMurinaePhenotypePromoter Regions, GeneticSciuridaeSkinHomeodomain ProteinsMelaninsMicrophthalmia-Associated Transcription Factor

Identifiers

PMID27806375
PMCPMC5292240
OpenAlexW2547794687

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.