Evidence map›Paper›PMID 27806314›Full record

ArticleOncotarget2016

TLR1 polymorphism rs4833095 as a risk factor for IgA nephropathy in a Chinese Han population: A case-control study.

Jie Gao, Linting Wei, Jiali Wei, Ganglian Yao, Li Wang, Meng Wang, Xinghan Liu, Cong Dai, Tianbo Jin, Zhijun Dai and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. The contribution of theAmerican journal of translational research · 2021
    Article
  3. Oncotarget · 2018
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jie GaoDepartment of Nephrology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Linting WeiDepartment of Nephrology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Jiali WeiDepartment of Nephrology, Hainan general hospital, Haikou 570311, China.
Ganglian YaoDepartment of Nephrology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Li WangDepartment of Nephrology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Meng WangDepartment of Oncology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Xinghan LiuDepartment of Oncology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Cong DaiDepartment of Oncology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Tianbo JinNational Engineering Research Center for Miniaturized Detection Systems, School of Life Sciences, Northwest University, Xi'an 710069, China.
Zhijun DaiDepartment of Oncology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Rongguo FuDepartment of Nephrology, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710004, China.
Second Affiliated Hospital of Xi'an Jiaotong University · CNHainan General Hospital · CNNorthwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toll-like receptors (TLRs) are a family of transmembrane receptors, and play a vital role in recognizing invading pathogens and activating innate immunity. Previous studies indicated that TLR1 single nucleotide polymorphisms (SNPs) might be associated with the risk of IgA nephropathy (IgAN). This study aims to investigate the relationship between TLR1 SNPs (rs4833095 and rs5743557) and IgAN in a Chinese Han population. This case-control study included 351 patients with IgAN and 310 healthy controls. Two SNPs (rs4833095 and rs5743557) of TLR1 were genotyped by Sequenom MassARRAY. Odds ratios (OR) with 95% confidence intervals (CI) were used to assess the relationship with IgAN. We found that both allele and genotype frequencies of rs5743557 were not associated with IgAN risk. Rs4833095 increased IgAN risk compared with controls in the allele, dominant and log-additive models (P = 0.04, 0.04 and 0.03, respectively). Further haplotype analysis revealed that the Trs4833095Trs5743557 haplotype may be a risk factor for IgAN (OR = 1.28; 95% CI = 1.01-1.63; P = 0.046). Furthermore, rs4833095 was associated with Lee's grades (OR = 1.75; 95% CI = 1.03-2.96; P = 0.04). However, there was no significant association between the genotype distributions of rs5743557 and clinical parameters of IgAN such as gender, 24 hour urine protein, blood pressure, and Lee's grades. Taken together, these findings suggest that the TLR1 rs4833095 polymorphism may play a role in the development and progression of IgAN.

Indexed as

Polymorphism, Single NucleotideAdultCase-Control StudiesChinaChi-Square DistributionDisease ProgressionFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGlomerulonephritis, IGAHaplotypesHumansLogistic ModelsMaleMiddle AgedToll-Like Receptor 1case-control studyIgANsingle nucleotide polymorphismsusceptibilitytoll-like receptor 1

Identifiers

PMID27806314
PMCPMC5347750
OpenAlexW2541569149

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.