Evidence map›Paper›PMID 27806088›Full record

ArticlePloS one2016

Evolution and Expression of Paxillin Genes in Teleost Fish.

Andrew E Jacob, Christopher E Turner, Jeffrey D Amack

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrew E JacobDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York, 13210, United States of America.
Christopher E TurnerDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York, 13210, United States of America.
Jeffrey D AmackDepartment of Cell and Developmental Biology, State University of New York, Upstate Medical University, Syracuse, New York, 13210, United States of America.
SUNY Upstate Medical University · US

Funding

STRUCTURE AND FUNCTION OF PAXILLINR01GM047607 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI TURNER, CHRISTOPHER E · 1996 to 2017
$5.5M
Regulation of Ciliated Cells that Control Cardiac LateralityR01HL095690 · NHLBI · UPSTATE MEDICAL UNIVERSITY · PI AMACK, JEFFREY D · 2009 to 2014
$1.7M
NHLBI NIH HHS R01 HL095690NIGMS NIH HHS R01 GM047607
6 · The paper itself

Abstract

backgroundPaxillin family proteins regulate intracellular signaling downstream of extracellular matrix adhesion. Tissue expression patterns and cellular functions of Paxillin proteins during embryo development remain poorly understood. Additionally, the evolution of this gene family has not been thoroughly investigated.

resultsThis report characterizes the evolution and expression of a novel Paxillin gene, called Paxillin-b, in Teleosts. Alignments indicate that Teleost Paxillin-a and Paxillin-b proteins are highly homologous to each other and to human Paxillin. Phylogenetic and synteny analyses suggest that these genes originated from the duplication of an ancestral Paxillin gene that was in a common ancestor of Teleosts and Tetrapods. Analysis of the spatiotemporal expression profiles of Paxillin-a and Paxillin-b using zebrafish revealed both overlapping and distinct domains for Paxillin-a and Paxillin-b during embryo development. Localization of zebrafish Paxillin orthologs expressed in mammalian cells demonstrated that both proteins localize to focal adhesions, similar to mammalian Paxillin. This suggests these proteins regulate adhesion-dependent processes in their endogenous tissues.

conclusionPaxillin-a and Paxillin-b were generated by duplication in Teleosts. These genes likely play similar roles as Paxillin genes in other organisms. This work provides a framework for functional investigation of Paxillin family members during development using the zebrafish as an in vivo model system.

Indexed as

AnimalsEvolution, MolecularFishesFish ProteinsFocal AdhesionsGene DuplicationGene Expression Regulation, DevelopmentalHumansPaxillinPhylogenySyntenyZebrafishZebrafish ProteinsFish ProteinsPaxillinpxna protein, zebrafishPXN protein, humanZebrafish Proteins

Identifiers

PMID27806088
PMCPMC5091871
OpenAlexW2548644553

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.