Evidence map›Paper›PMID 27805248›Full record

ArticleJournal of biomedical optics2016

Raman microscopy of bladder cancer cells expressing green fluorescent protein.

Gurjit S Mandair, Amy L Han, Evan T Keller, Michael D Morris

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Environmental science and ecotechnology · 2022
    Review
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gurjit S MandairUniversity of Michigan, School of Dentistry, Department of Biologic and Materials Sciences, 1011 North University Avenue, Ann Arbor, Michigan 48109-1078, United States.
Amy L HanUniversity of Michigan, Department of Urology and Biointerfaces Institute, NCRC Building 20, 2800 Plymouth Road, Ann Arbor, Michigan 48109-2800, United States.
Evan T KellerUniversity of Michigan, Department of Urology and Biointerfaces Institute, NCRC Building 20, 2800 Plymouth Road, Ann Arbor, Michigan 48109-2800, United States.
Michael D MorrisUniversity of Michigan, Department of Chemistry, 930 North University Avenue, Ann Arbor, Michigan 48109-1055, United States.

Funding

Tumor microvesicle-mediated modulation of the bone microenvironmentP01CA093900 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KELLER, EVAN T · 2004 to 2024
$29.6M
A Study of Reduced Bone Quality as a Cause of FracturesR01AR054496 · NIAMS · CREIGHTON UNIVERSITY · PI RECKER, ROBERT ROY · 2008 to 2012
$4.4M
NCI NIH HHS P01 CA093900NIAMS NIH HHS R01 AR054496
6 · The paper itself

Abstract

Gene engineering is a commonly used tool in cellular biology to determine changes in function or expression of downstream targets. However, the impact of genetic modulation on biochemical effects is less frequently evaluated. The aim of this study is to use Raman microscopy to assess the biochemical effects of gene silencing on T24 and UMUC-13 bladder cancer cell lines. Cellular biochemical information related to nucleic acid and lipogenic components was obtained from deconvolved Raman spectra. We show that the green fluorescence protein (GFP), the chromophore that served as a fluorescent reporter for gene silencing, could also be detected by Raman microscopy. Only the gene-silenced UMUC-13 cell lines exhibited low-to-moderate GFP fluorescence as determined by fluorescence imaging and Raman spectroscopic studies. Moreover, we show that gene silencing and cell phenotype had a greater effect on nucleic acid and lipogenic components with minimal interference from GFP expression. Gene silencing was also found to perturb cellular protein secondary structure in which the amount of disorderd protein increased at the expense of more ordered protein. Overall, our study identified the spectral signature for cellular GFP expression and elucidated the effects of gene silencing on cancer cell biochemistry and protein secondary structure.

Indexed as

Cell Line, TumorGene SilencingGreen Fluorescent ProteinsHumansProtein ConformationSpectrum Analysis, RamanUrinary BladderUrinary Bladder NeoplasmsGreen Fluorescent Proteins

Identifiers

PMID27805248
PMCPMC8357324

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.