Evidence map›Paper›PMID 27804009›Full record

ArticleInternational journal of computer assisted radiology and surgery2017

A new method for the automatic retrieval of medical cases based on the RadLex ontology.

A B Spanier, D Cohen, L Joskowicz

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Article in International journal of computer assisted radiology and surgery, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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5citing papers in PubMed
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5 citing papers in PubMed.

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  5. Impact of translation on named-entity recognition in radiology texts.Database : the journal of biological databases and curation · 2017
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5 · Who and what money

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3 authors.

A B SpanierThe Rachel and Selim Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Givat Ram Campus, 91904, Jerusalem, Israel. assaf.spanier@mail.huji.ac.il.ORCID http://orcid.org/0000-0001-5091-8002
D CohenThe Rachel and Selim Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Givat Ram Campus, 91904, Jerusalem, Israel.
L JoskowiczThe Rachel and Selim Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Givat Ram Campus, 91904, Jerusalem, Israel.

Funding

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6 · The paper itself

Abstract

purposeThe goal of medical case-based image retrieval (M-CBIR) is to assist radiologists in the clinical decision-making process by finding medical cases in large archives that most resemble a given case. Cases are described by radiology reports comprised of radiological images and textual information on the anatomy and pathology findings. The textual information, when available in standardized terminology, e.g., the RadLex ontology, and used in conjunction with the radiological images, provides a substantial advantage for M-CBIR systems.

methodsWe present a new method for incorporating textual radiological findings from medical case reports in M-CBIR. The input is a database of medical cases, a query case, and the number of desired relevant cases. The output is an ordered list of the most relevant cases in the database. The method is based on a new case formulation, the Augmented RadLex Graph and an Anatomy-Pathology List. It uses a new case relatedness metric [Formula: see text] that prioritizes more specific medical terms in the RadLex tree over less specific ones and that incorporates the length of the query case.

resultsAn experimental study on 8 CT queries from the 2015 VISCERAL 3D Case Retrieval Challenge database consisting of 1497 volumetric CT scans shows that our method has accuracy rates of 82 and 70% on the first 10 and 30 most relevant cases, respectively, thereby outperforming six other methods.

conclusionsThe increasing amount of medical imaging data acquired in clinical practice constitutes a vast database of untapped diagnostically relevant information. This paper presents a new hybrid approach to retrieving the most relevant medical cases based on textual and image information.

Indexed as

AlgorithmsInformation Storage and RetrievalRadiology Information SystemsAutomationClinical Decision-MakingDatabases, FactualHumansImaging, Three-DimensionalRadiologyTomography, X-Ray ComputedMedical Content-Based Image RetrievalRadLex ontologyRelatednessSimilarity metric

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.