Evidence map›Paper›PMID 27803951›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

A GBS-SNP-based linkage map and quantitative trait loci (QTL) associated with resistance to Fusarium oxysporum f. sp. niveum race 2 identified in Citrullus lanatus var. citroides.

Sandra E Branham, Amnon Levi, Mark W Farnham, W Patrick Wechter

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Mapping and validation of Fusarium wilt race 2 resistance QTL from Citrullus amarus line USVL246-FR2.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Improving Drought Stress Tolerance in Ramie (Frontiers in plant science · 2022
    Review
  5. Systematic Genome-Wide Study and Expression Analysis ofInternational journal of molecular sciences · 2021
    Article
  6. Article
  7. Proteomic Analysis ofFrontiers in plant science · 2021
    Article
  8. Article
  9. QTL mapping of resistance to Fusarium oxysporum f. sp. niveum race 2 and Papaya ringspot virus in Citrullus amarus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  10. Article
  11. Article
  12. QTL mapping of resistance to bacterial fruit blotch in Citrullus amarus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sandra E BranhamUSDA, ARS, US Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC, 29414, USA.
Amnon LeviUSDA, ARS, US Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC, 29414, USA.
Mark W FarnhamUSDA, ARS, US Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC, 29414, USA.
W Patrick WechterUSDA, ARS, US Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC, 29414, USA. pat.wechter@ars.usda.gov.
U.S. Vegetable Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA major QTL for resistance to Fusarium oxysporum f. sp. niveum race 2 was mapped to a narrow 1.2 Mb interval using a high-density GBS-SNP linkage map, the first map of Citrullus lanatus var. citroides. Fusarium wilt, a fungal disease caused by Fusarium oxysporum f. sp. niveum (Fon), devastates watermelon crop production worldwide. Several races, which are differentiated by host range, of the pathogen exist. Resistance to Fon race 2, a particularly virulent strain prevalent in the United States, does not exist in edible cultivars of the sweet cultivated watermelon Citrullus lanatus var. lanatus (Cll) and has been well described in a few plant introductions of the wild subspecies of watermelon, C. lanatus var. citroides (Clc). Clc provides a vital source of genetic diversity, as well as resistance to numerous diseases. Unfortunately, both genetic diversity and disease resistance are lacking in Cll due to the narrow genetic base. Despite the importance of Clc to continued watermelon improvement, intra-variety genetic studies are lacking. Here, we present the first Clc genetic linkage map, generated with 2495 single nucleotide polymorphisms developed through genotyping-by-sequencing, and use it to identify quantitative trait loci associated with Fon race 2 resistance. Multiple QTL mapping in a Clc F

Indexed as

Quantitative Trait LociChromosome MappingCitrullusCrosses, GeneticDisease ResistanceFusariumGenetic LinkageGenotyping TechniquesPlant DiseasesPolymorphism, Single Nucleotide

Identifiers

PMID27803951
OpenAlexW2548339421

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.