Evidence map›Paper›PMID 27803175›Full record

Trial reportThe Journal of infectious diseases2017

Significant Correlation Between the Infant Gut Microbiome and Rotavirus Vaccine Response in Rural Ghana.

Vanessa C Harris, George Armah, Susana Fuentes, Katri E Korpela, Umesh Parashar, John C Victor, Jacqueline Tate, Carolina de Weerth, Carlo Giaquinto, Willem Joost Wiersinga and 2 more

Open access · hybridAbstract readClinical Trial
In one paragraph

Trial report in The Journal of infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 207 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
207citing papers in PubMed, 1 pooled it
21.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

207 citing papers in PubMed, 1 synthesis or guideline pooled it, 308 citations in OpenAlex.

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  10. Pediatrics · 2019
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  11. A phase I trial of WRSS1, aHuman vaccines & immunotherapeutics · 2019
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147 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 5 countries.

Vanessa C HarrisAmsterdam Institute for Global Health and Development.
George ArmahNoguchi Memorial Institute for Medical Research, College of Health Sciences, University of Ghana, Legon.
Susana FuentesLaboratory of Microbiology, Wageningen University.
Katri E KorpelaDepartment of Bacteriology and Immunology, and Immunobiology, University of Helsinki, Finland.
Umesh ParasharDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, Center for Disease Control and Prevention, Atlanta, Georgia.
John C VictorPATH, Vaccine Access and Delivery, Seattle, Washington.
Jacqueline TateDivision of Viral Diseases, National Center for Immunization and Respiratory Diseases, Center for Disease Control and Prevention, Atlanta, Georgia.
Carolina de WeerthBehavioral Science Institute, Radboud University, Nijmegen, The Netherlands.
Carlo GiaquintoDepartment of Paediatrics, University of Padova, Italy.
Willem Joost WiersingaCenter for Experimental and Molecular Medicine, Division of Infectious Diseases, Academic Medical Center, University of Amsterdam.
Kristen D C LewisCenter for Experimental and Molecular Medicine, Division of Infectious Diseases, Academic Medical Center, University of Amsterdam.
Willem M de VosLaboratory of Microbiology, Wageningen University.
National Center for Immunization and Respiratory Diseases · USUniversity of Amsterdam · NLUniversity of Helsinki · FIAmsterdam Institute for Global Health and Development · NLNoguchi Memorial Institute for Medical Research · GHProgram for Appropriate Technology in Health · USRadboud University Nijmegen · NLUniversity of Padua · ITWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRotavirus (RV) is the leading cause of diarrhea-related death in children worldwide and 95% of RV-associated deaths occur in Africa and Asia where RV vaccines (RVVs) have lower efficacy. We hypothesize that differences in intestinal microbiome composition correlate with the decreased RVV efficacy observed in poor settings.

methodsWe conducted a nested, case-control study comparing prevaccination, fecal microbiome compositions between 6-week old, matched RVV responders and nonresponders in rural Ghana. These infants' microbiomes were then compared with 154 age-matched, healthy Dutch infants' microbiomes, assumed to be RVV responders. Fecal microbiome analysis was performed in all groups using the Human Intestinal Tract Chip.

resultsWe analyzed findings in 78 Ghanaian infants, including 39 RVV responder and nonresponder pairs. The overall microbiome composition was significantly different between RVV responders and nonresponders (FDR, 0.12), and Ghanaian responders were more similar to Dutch infants than nonresponders (P = .002). RVV response correlated with an increased abundance of Streptococcus bovis and a decreased abundance of the Bacteroidetes phylum in comparisons between both Ghanaian RVV responders and nonresponders (FDR, 0.008 vs 0.003) and Dutch infants and Ghanaian nonresponders (FDR, 0.002 vs 0.009).

conclusionsThe intestinal microbiome composition correlates significantly with RVV immunogenicity and may contribute to the diminished RVV immunogenicity observed in developing countries.

Indexed as

Gastrointestinal MicrobiomeAntibodies, ViralBacteriaBacteroidetesCase-Control StudiesFecesFemaleGastroenteritisGhanaHumansImmunity, MucosalImmunoglobulin AInfantMaleMicroarray AnalysisPregnancyAntibodies, ViralImmunoglobulin ARotavirus VaccinesVaccines, Attenuatedintestinal microbiomemucosal immunityrotavirus vaccine

Identifiers

PMID27803175
PMCPMC5225256
OpenAlexW2546024328

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.