Evidence map›Paper›PMID 27803167›Full record

ArticleThe Journal of biological chemistry2016

A Novel Putrescine Exporter SapBCDF of Escherichia coli.

Yuta Sugiyama, Atsuo Nakamura, Mitsuharu Matsumoto, Ayaka Kanbe, Mikiyasu Sakanaka, Kyohei Higashi, Kazuei Igarashi, Takane Katayama, Hideyuki Suzuki, Shin Kurihara

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
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  4. Review
  5. The Evolution of ABC Importers.Journal of molecular biology · 2025
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  10. Article
  11. Biomedicines · 2023
    Article
  12. Isolation of the high polyamine-producing bacteriumBioscience of microbiota, food and health · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. The citrus plant pathogenBiochemistry and biophysics reports · 2021
    Article
  18. Genome-Wide Screening of Oxidizing Agent Resistance Genes inAntioxidants (Basel, Switzerland) · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Yuta SugiyamaFrom the Division of Applied Life Science, Graduate School of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa 921-8836.
Atsuo Nakamurathe Dairy Science and Technology Institute, Kyodo Milk Industry Co. Ltd., Tokyo 190-0182.
Mitsuharu Matsumotothe Dairy Science and Technology Institute, Kyodo Milk Industry Co. Ltd., Tokyo 190-0182.
Ayaka Kanbethe Division of Applied Biology, Kyoto Institute of Technology, Kyoto 606-8585.
Mikiyasu SakanakaFrom the Division of Applied Life Science, Graduate School of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa 921-8836.
Kyohei Higashithe Division of Biopharmaceutical Sciences, Graduate School of Pharmaceutical Sciences, Chiba University, Chiba 260-8675.
Kazuei Igarashithe Amine Pharma Research Institute, Innovation Plaza at Chiba University, Chiba 260-0856, and.
Takane KatayamaFrom the Division of Applied Life Science, Graduate School of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa 921-8836.
Hideyuki Suzukithe Division of Applied Biology, Kyoto Institute of Technology, Kyoto 606-8585.
Shin KuriharaFrom the Division of Applied Life Science, Graduate School of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa 921-8836, kuri711@ishikawa-pu.ac.jp.
Ishikawa Prefectural University · JPKyoto Institute of Technology · JPAmine Pharma (Japan) · JPChiba University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent research has suggested that polyamines (putrescine, spermidine, and spermine) in the intestinal tract impact the health of animals either negatively or positively. The concentration of polyamines in the intestinal tract results from the balance of uptake and export of the intestinal bacteria. However, the mechanism of polyamine export from bacterial cells to the intestinal lumen is still unclear. In Escherichia coli, PotE was previously identified as a transporter responsible for putrescine excretion in an acidic growth environment. We observed putrescine concentration in the culture supernatant was increased from 0 to 50 μm during growth of E. coli under neutral conditions. Screening for the unidentified putrescine exporter was performed using a gene knock-out collection of E. coli, and deletion of sapBCDF significantly decreased putrescine levels in the culture supernatant. Complementation of the deletion mutant with the sapBCDF genes restored putrescine levels in the culture supernatant. Additionally, the ΔsapBCDF strain did not facilitate uptake of putrescine from the culture supernatant. Quantification of stable isotope-labeled putrescine derived from stable isotope-labeled arginine supplemented in the medium revealed that SapBCDF exported putrescine from E. coli cells to the culture supernatant. It was previously reported that SapABCDF of Salmonella enterica sv. typhimurium and Haemophilus influenzae conferred resistance toantimicrobial peptides; however, the E. coli ΔsapBCDF strain did not affect resistance to antimicrobial peptide LL-37. These results strongly suggest that the natural function of the SapBCDF proteins is the export of putrescine.

Indexed as

Antimicrobial Cationic PeptidesAntiportersATP-Binding Cassette TransportersBiological Transport, ActiveCathelicidinsDrug Resistance, BacterialEscherichia coliEscherichia coli ProteinsPutrescineAntimicrobial Cationic PeptidesAntiportersATP-Binding Cassette TransportersCathelicidinsEscherichia coli ProteinsPotE protein, E coliPutrescineSapD protein, E coliantimicrobial peptidebacterial metabolismEscherichia coli (E. coli)gut microbepolyaminetransporter

Identifiers

PMID27803167
PMCPMC5159496
OpenAlexW2546422483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.