Evidence map›Paper›PMID 27802388›Full record

ArticleJournal of proteome research2017

Identification of MHC-Bound Peptides from Dendritic Cells Infected with Salmonella enterica Strain SL1344: Implications for a Nontyphoidal Salmonella Vaccine.

Karuna P Karunakaran, Hong Yu, Xiaozhou Jiang, Queenie Chan, Michael F Goldberg, Marc K Jenkins, Leonard J Foster, Robert C Brunham

Abstract read
In one paragraph

Article in Journal of proteome research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Discovery immunology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Immunopeptidomics ofBiology · 2024
    Article
  9. A TCRVβ6Journal of cellular and molecular medicine · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Deimmunizing substitutions inThe Journal of biological chemistry · 2019
    Article
  17. Article
  18. Article
  19. Vaccination against Salmonella Infection: the Mucosal Way.Microbiology and molecular biology reviews : MMBR · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Karuna P KarunakaranVaccine Research Laboratory, University of British Columbia Centre for Disease Control , Vancouver, British Columbia V5Z 4R4, Canada.
Hong YuVaccine Research Laboratory, University of British Columbia Centre for Disease Control , Vancouver, British Columbia V5Z 4R4, Canada.
Xiaozhou JiangVaccine Research Laboratory, University of British Columbia Centre for Disease Control , Vancouver, British Columbia V5Z 4R4, Canada.
Queenie ChanDepartment of Biochemistry and Molecular Biology, Centre for High-Throughput Biology, University of British Columbia , Vancouver, British Columbia V6T 1Z3, Canada.
Michael F GoldbergCenter for Immunology, Department of Microbiology and Immunology, University of Minnesota Medical School , Minneapolis, Minnesota 55455, United States.
Marc K JenkinsCenter for Immunology, Department of Microbiology and Immunology, University of Minnesota Medical School , Minneapolis, Minnesota 55455, United States.
Leonard J FosterDepartment of Biochemistry and Molecular Biology, Centre for High-Throughput Biology, University of British Columbia , Vancouver, British Columbia V6T 1Z3, Canada.
Robert C BrunhamVaccine Research Laboratory, University of British Columbia Centre for Disease Control , Vancouver, British Columbia V5Z 4R4, Canada.
University of British Columbia · CABC Centre for Disease Control · CAUniversity of Minnesota Medical Center · US

Funding

Type I interferons in tolerance in the steady stateP01AI035296 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HOGQUIST, KRISTIN A. · 1993 to 2023
$31.1M
Protective CD4+ T CellsR01AI103760 · NIAID · UNIVERSITY OF MINNESOTA · PI JENKINS, MARC KEVIN · 2013 to 2022
$4.2M
Modular Subunit Vaccine for SalmonellaR01AI066018 · NIAID · UNIVERSITY OF MINNESOTA · PI JENKINS, MARC KEVIN · 2006 to 2010
$1.5M
NIAID NIH HHS P01 AI035296NIAID NIH HHS R01 AI066018NIAID NIH HHS R01 AI103760
6 · The paper itself

Abstract

Worldwide Salmonella enterica infections result in substantial morbidity and mortality and are the major cause of infant bacteremia in Sub-Saharan Africa. Diseases caused by Salmonella are treatable with antibiotics, but successful antibiotic treatment has become difficult due to antimicrobial resistance and collateral effects on the microbiome. An effective vaccine together with public health efforts may be a better strategy to control these infections. Protective immunity against Salmonella depends primarily on CD4 T-cell-mediated immune responses; therefore, identifying relevant T-cell antigens is necessary for Salmonella vaccine development. We previously used a dendritic-cell-based immunoproteomics approach in our laboratory to identify T-cell antigens. The testing of these antigens as vaccine candidates against Chlamydia infection in mice yielded positive results. We applied this technology in the present study by infecting murine bone-marrow-derived dendritic cells from C57BL/6 mice with Salmonella enterica strain SL1344, followed by immunoaffinity isolation of MHC class I and II molecules and elution of bound peptides. The sequences of the peptides were identified using tandem mass spectrometry. We identified 87 MHC class-II- and 23 MHC class-I-binding Salmonella-derived peptides. Four of the 12 highest scoring class-II-binding Salmonella peptides stimulated IFN-γ production by CD4

Indexed as

Amino Acid SequenceAnimalsAntigens, BacterialBone Marrow CellsCD4-Positive T-LymphocytesChromatography, AffinityDendritic CellsEpitopes, T-LymphocyteFemaleHistocompatibility Antigens Class IHistocompatibility Antigens Class IIInterferon-gammaMiceMice, Inbred C57BLPeptidesSalmonella entericaAntigens, BacterialEpitopes, T-LymphocyteHistocompatibility Antigens Class IHistocompatibility Antigens Class IIInterferon-gammaPeptidesSalmonella VaccinesantigenepitopeimmunoproteomicsMHCpeptideSalmonellaT cellvaccine

Identifiers

PMID27802388
PMCPMC6375678
OpenAlexW2548419683

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.