Evidence map›Paper›PMID 27799660›Full record

ArticleDisease markers2016

Toward Noninvasive Diagnosis of IgA Nephropathy: A Pilot Urinary Metabolomic and Proteomic Study.

Michaela Neprasova, Dita Maixnerova, Jan Novak, Colin Reily, Bruce A Julian, Jan Boron, Petr Novotny, Miloslav Suchanek, Vladimir Tesar, Petr Kacer

Open access · hybridAbstract read
In one paragraph

Article in Disease markers, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

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  13. NanoTiONanomaterials (Basel, Switzerland) · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Michaela NeprasovaFirst Faculty of Medicine, Department of Nephrology, Charles University and General University Hospital in Prague, Prague 2, Czech Republic.
Dita MaixnerovaFirst Faculty of Medicine, Department of Nephrology, Charles University and General University Hospital in Prague, Prague 2, Czech Republic.ORCID 0000-0002-6733-2857
Jan NovakDepartments of Microbiology and Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.ORCID 0000-0002-9211-6670
Colin ReilyDepartments of Microbiology and Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.ORCID 0000-0002-4033-1360
Bruce A JulianDepartments of Microbiology and Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.ORCID 0000-0001-5781-1021
Jan BoronUniversity of Chemistry and Technology, Technická 5, 166 28 Prague 6, Czech Republic; Essence Line, Plzeňská 130/221, 150 00 Prague 5, Czech Republic.ORCID 0000-0002-3301-4842
Petr NovotnyEssence Line, Plzeňská 130/221, 150 00 Prague 5, Czech Republic.ORCID 0000-0002-9193-8138
Miloslav SuchanekUniversity of Chemistry and Technology, Technická 5, 166 28 Prague 6, Czech Republic.
Vladimir TesarFirst Faculty of Medicine, Department of Nephrology, Charles University and General University Hospital in Prague, Prague 2, Czech Republic.
Petr KacerUniversity of Chemistry and Technology, Technická 5, 166 28 Prague 6, Czech Republic.ORCID 0000-0003-0351-3795
Charles University · CZUniversity of Alabama at Birmingham · USEssence Line (Czechia) · CZUniversity of Chemistry and Technology, Prague · CZ

Funding

UAB-UCSD O'Brien Core Center for Acute Kidney Injury ResearchP30DK079337 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI MEHTA, RAVINDRA L. · 2008 to 2022
$18.3M
Elucidating IgA Nephropathy through Genetic Studies of IgA1 GlycosylationR01DK082753 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GHARAVI, ALI G, NOVAK, JAN · 2009 to 2024
$8.7M
Molecular Basis of Pathogenicity of IgA1-containing Immune ComplexesR01DK078244 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI JAN NOVAK · 2007 to 2026
$6.0M
Analytical tools for the analysis of clustered O-glycans in clinical samplesR01GM098539 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI RENFROW, MATTHEW B · 2011 to 2019
$2.7M
Abnormal STAT3 Signaling and Aberrant O-Glycosylation of IgA1 in IgA NephropathyK01DK106341 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI REILY, COLIN ROBERT · 2015 to 2021
$918k
Molecular Basis of Pathogenicity of IgA1-containing Immune ComplexesR56DK078244 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI NOVAK, JAN · 2012 to 2012
$92k
NIDDK NIH HHS K01 DK106341NIDDK NIH HHS P30 DK079337NIDDK NIH HHS R01 DK078244NIDDK NIH HHS R01 DK082753NIDDK NIH HHS R56 DK078244NIGMS NIH HHS R01 GM098539
6 · The paper itself

Abstract

IgA nephropathy is diagnosed by renal biopsy, an invasive procedure with a risk of significant complications. Noninvasive approaches are needed for possible diagnostic purposes and especially for monitoring disease activity or responses to treatment. In this pilot project, we assessed the utility of urine samples as source of biomarkers of IgA nephropathy. We used spot urine specimens from 19 healthy controls, 11 patients with IgA nephropathy, and 8 renal-disease controls collected on day of renal biopsy. Urine samples were analyzed using untargeted metabolomic and targeted proteomic analyses by several experimental techniques: liquid chromatography coupled with mass spectrometry, immunomagnetic isolation of target proteins coupled with quantitation by mass spectrometry, and protein arrays. No single individual biomarker completely differentiated the three groups. Therefore, we tested the utility of several markers combined in a panel. Discriminant analysis revealed that combination of seven markers, three metabolites (dodecanal, 8-hydroxyguanosine, and leukotriene C

Indexed as

MetabolomeProteomeAdultAgedAldehydesalpha 1-AntitrypsinBiomarkersCase-Control StudiesFemaleGlomerulonephritis, IGAGuanosineHeparan SulfateHumansImmunoglobulin ALeukotriene C4Male8-hydroxyguanosineAldehydesalpha 1-AntitrypsinBiomarkersGuanosineHeparan SulfateImmunoglobulin ALeukotriene C4ProteomeUromodulin

Identifiers

PMID27799660
PMCPMC5075301
OpenAlexW2529130100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.