Evidence map›Paper›PMID 27799635›Full record

ArticleThe American journal of tropical medicine and hygiene2017

Isolation of Coronavirus NL63 from Blood from Children in Rural Haiti: Phylogenetic Similarities with Recent Isolates from Malaysia.

Valery Madsen Beau De Rochars, John Lednicky, Sarah White, Julia Loeb, Maha A Elbadry, Taina Telisma, Sonese Chavannes, Marie Gina Anilis, Eleonora Cella, Massimo Ciccozzi and 3 more

Open access · greenAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Analysis of Zika Virus Sequence Data Associated with a School Cohort in Haiti.The American journal of tropical medicine and hygiene · 2022
    Article
  3. Isolation of a Novel Recombinant Canine Coronavirus From a Visitor to Haiti: Further Evidence of Transmission of Coronaviruses of Zoonotic Origin to Humans.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2022
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Clinical and Epidemiologic Patterns of Chikungunya Virus Infection and Coincident Arboviral Disease in a School Cohort in Haiti, 2014-2015.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Valery Madsen Beau De RocharsEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
John LednickyEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Sarah WhiteEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Julia LoebEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Maha A ElbadryEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Taina TelismaEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Sonese ChavannesEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Marie Gina AnilisEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Eleonora CellaEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Massimo CiccozziDepartment of Infectious Parasitic and Immunomediated Diseases, Reference Centre on Phylogeny, Molecular Epidemiology and Microbial Evolution (FEMEM)/Epidemiology Unit, Istituto Superiore di Sanita, Rome, Italy.
Bernard A OkechEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
Marco SalemiEmerging Pathogens Institute, University of Florida, Gainesville, Florida.
J Glenn MorrisEmerging Pathogens Institute, University of Florida, Gainesville, Florida. jgmorris@epi.ufl.edu.
University of Florida · USIstituto Superiore di Sanità · IT

Funding

Recurrence of Cholera in Haiti: Exploration of Contributing Factors and Intervention StrategiesR01AI126357 · NIAID · UNIVERSITY OF FLORIDA · PI John Glenn Morris · 2016 to 2026
$7.3M
NIAID NIH HHS R01 AI126357
6 · The paper itself

Abstract

Human coronavirus (HCoV) NL63 is recognized as a common cause of upper respiratory infections and influenza-like illness. In screening children with acute undifferentiated febrile illness in a school cohort in rural Haiti, we identified HCoV-NL63 in blood samples from four children. Cases clustered over an 11-day period; children did not have respiratory symptoms, but two had gastrointestinal complaints. On phylogenetic analysis, the Haitian HCoV-NL63 strains cluster together in a highly supported monophyletic clade linked most closely with recently reported strains from Malaysia; two respiratory HCoV-NL63 strains identified in north Florida in the same general period form a separate clade, albeit again with close linkages with the Malaysian strains. Our data highlight the variety of presentations that may be seen with HCoV-NL63, and underscore the apparent ease with which CoV strains move among countries, with our data consistent with recurrent introduction of strains into the Caribbean (Haiti and Florida) from Asia.

Indexed as

Cell LineChildCoronavirusCoronavirus InfectionsFemaleGenotypeHaitiHumansMalaysiaMalePhylogenyRural Population

Identifiers

PMID27799635
PMCPMC5239682
OpenAlexW2542415557

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.