Evidence map›Paper›PMID 27799470›Full record

ArticleNucleic acids research2017

FlyBase at 25: looking to the future.

L Sian Gramates, Steven J Marygold, Gilberto Dos Santos, Jose-Maria Urbano, Giulia Antonazzo, Beverley B Matthews, Alix J Rey, Christopher J Tabone, Madeline A Crosby, David B Emmert and 9 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 325 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
325citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

325 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Toxics · 2023
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Distal nucleotides affect the rate of stop codon read-through.Quantitative biology (Beijing, China) · 2023
    Article
  19. Article
  20. Article

265 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

L Sian GramatesThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA sian@morgan.harvard.edu.ORCID 0000-0002-6700-3797
Steven J MarygoldDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Gilberto Dos SantosThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Jose-Maria UrbanoDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Giulia AntonazzoDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Beverley B MatthewsThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Alix J ReyDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Christopher J TaboneThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Madeline A CrosbyThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
David B EmmertThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Kathleen FallsThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Joshua L GoodmanDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Yanhui HuDepartment of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA.
Laura PontingDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Andrew J SchroederThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Victor B StreletsDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Jim ThurmondDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Pinglei ZhouThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
the FlyBase Consortium

Funding

Resource Project CoreU41HG000739 · NHGRI · HARVARD UNIVERSITY · PI PERRIMON, NORBERT · 2014 to 2022
$32.3M
Medical Research Council G1000968NHGRI NIH HHS U41 HG000739Wellcome Trust
6 · The paper itself

Abstract

Since 1992, FlyBase (flybase.org) has been an essential online resource for the Drosophila research community. Concentrating on the most extensively studied species, Drosophila melanogaster, FlyBase includes information on genes (molecular and genetic), transgenic constructs, phenotypes, genetic and physical interactions, and reagents such as stocks and cDNAs. Access to data is provided through a number of tools, reports, and bulk-data downloads. Looking to the future, FlyBase is expanding its focus to serve a broader scientific community. In this update, we describe new features, datasets, reagent collections, and data presentations that address this goal, including enhanced orthology data, Human Disease Model Reports, protein domain search and visualization, concise gene summaries, a portal for external resources, video tutorials and the FlyBase Community Advisory Group.

Indexed as

Databases, GeneticAnimalsComputational BiologyDisease Models, AnimalDrosophilaGenetic Association StudiesGenomicsHumansWeb Browser

Identifiers

PMID27799470
PMCPMC5210523

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.