Evidence map›Paper›PMID 27799303›Full record

ArticleThe Journal of biological chemistry2016

Different Doublecortin (DCX) Patient Alleles Show Distinct Phenotypes in Cultured Neurons: EVIDENCE FOR DIVERGENT LOSS-OF-FUNCTION AND "OFF-PATHWAY" CELLULAR MECHANISMS.

Chan Choo Yap, Laura Digilio, Lloyd McMahon, Matylda Roszkowska, Christopher J Bott, Kamil Kruczek, Bettina Winckler

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chan Choo YapFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Laura DigilioFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Lloyd McMahonFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Matylda RoszkowskaFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Christopher J BottFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Kamil KruczekFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908.
Bettina WincklerFrom the Department of Cell Biology, University of Virginia, Charlottesville, Virginia 22908 bwinckler@virginia.edu.ORCID http://orcid.org/0000-0002-7924-9313
University of Virginia · US

Funding

TRAINING IN CELL AND MOLECULAR BIOLOGYT32GM008136 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI STUKENBERG, P. TODD · 1985 to 2020
$8.5M
Multifunctional roles for doublecortin (DCX)in neural developmentR01NS081674 · NINDS · UNIVERSITY OF VIRGINIA · PI WINCKLER, BETTINA R · 2013 to 2017
$1.7M
NIGMS NIH HHS T32 GM008136NINDS NIH HHS R01 NS081674
6 · The paper itself

Abstract

Doublecortin on the X-chromosome (DCX) is a neuronal microtubule-binding protein with a multitude of roles in neurodevelopment. In humans, DCX is a major genetic locus for X-linked lissencephaly. The best studied defects are in neuronal migration during corticogenesis and in the hippocampus, as well as axon and dendrite growth defects. Much effort has been directed at understanding the molecular and cellular bases of DCX-linked lissencephaly. The focus has been in particular on defects in microtubule assembly and bundling, using knock-out mice and expression of WT and mutant Dcx in non-neuronal cells. Dcx also binds other proteins besides microtubules, such as spinophilin (abbreviated spn; gene name Ppp1r9b protein phosphatase 1 regulatory subunit 9b) and the clathrin adaptors AP-1 and AP-2. Even though many non-sense and missense mutations of Dcx are known, their molecular and cellular defects are still only incompletely understood. It is also largely unknown how neurons are affected by expression of DCX patient alleles. We have now characterized several patient DCX alleles (DCX-R89G, DCX-R59H, DCX-246X, DCX-272X, and DCX-303X) using a gain-of-function dendrite growth assay in cultured rat neurons in combination with the determination of molecular binding activities and subcellular localization in non-neuronal and neuronal cells. First, we find that several mutants (Dcx-R89G and Dcx-272X) were loss-of-function alleles (as had been postulated) but surprisingly acted via different cellular mechanisms. Second, one allele (Dcx-R59H) formed cytoplasmic aggregates, which contained Hspa1B (heat shock protein 1B hsp70) and ubiquitinated proteins, trapped other cytoskeletal proteins, including spinophilin, and led to increased autophagy. This allele could thus be categorized as "off-pathway"/possibly neomorph. Our findings thus suggested that distinct DCX alleles caused dysfunction by different mechanisms.

Indexed as

AllelesAnimalsCell MovementCells, CulturedDendritesDoublecortin Domain ProteinsDoublecortin ProteinHippocampusHumansMiceMicrotubule-Associated ProteinsMicrotubulesMutagenesis, Site-DirectedMutationNeurogenesisNeuronsDCX protein, humanDcx protein, mouseDcx protein, ratDoublecortin Domain ProteinsDoublecortin ProteinMicrotubule-Associated ProteinsNeuropeptidesaggregationdendritedoublecortinlissencephalymicrotubulemultifunctional proteinneurite outgrowthprotein aggregation

Identifiers

PMID27799303
PMCPMC5207172
OpenAlexW2544355903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.