Evidence map›Paper›PMID 27799140›Full record

ArticleCancer immunology research2016

Endogenous Neoantigen-Specific CD8 T Cells Identified in Two Glioblastoma Models Using a Cancer Immunogenomics Approach.

Tanner M Johanns, Jeffrey P Ward, Christopher A Miller, Courtney Wilson, Dale K Kobayashi, Diane Bender, Yujie Fu, Anton Alexandrov, Elaine R Mardis, Maxim N Artyomov and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer immunology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 2 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 2 syntheses or guidelines pooled it, 103 citations in OpenAlex.

  1. A systematic review of immunotherapy in high-grade glioma: learning from the past to shape future perspectives.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2024
    Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Intratumoral delivery of 4-1BBL boosts IL-12-triggered anti-glioma immunity.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Systemically targeting monocytic myeloid-derived suppressor cells using dendrimers and their cell-level biodistribution kinetics.Journal of controlled release : official journal of the Controlled Release Society · 2024
    Article
  17. Review
  18. Article
  19. Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Tanner M JohannsDivision of Oncology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri.
Jeffrey P WardDivision of Oncology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri.
Christopher A MillerThe McDonnell Genome Institute, Washington University, St. Louis, Missouri.
Courtney WilsonCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Dale K KobayashiCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Diane BenderCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Yujie FuCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Anton AlexandrovDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri.
Elaine R MardisThe McDonnell Genome Institute, Washington University, St. Louis, Missouri.
Maxim N ArtyomovDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri.
Robert D SchreiberCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri.
Gavin P DunnCenter for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, Missouri. gpdunn@wustl.edu.
Washington University in St. Louis · USJames S. McDonnell Foundation · US

Funding

PRE-AND POSTGRADUATE TRAINING IN MOLECULAR HEMATOLOGYT32HL007088 · NHLBI · WASHINGTON UNIVERSITY · PI Grant Anthony Challen, Stephen Oh · 1985 to 2026
$14.1M
Washington University Paul Calabresi K12 Career Development Award for Clinical OncologyK12CA167540 · NCI · WASHINGTON UNIVERSITY · PI John F. Dipersio, Ramaswamy Govindan · 2012 to 2026
$11.7M
IMMUNOBIOLOGY OF MALIGNANT GLIOMAK08NS092912 · NINDS · WASHINGTON UNIVERSITY · PI DUNN, GAVIN PETER · 2015 to 2019
$877k
NCI NIH HHS K12 CA167540NHLBI NIH HHS T32 HL007088NINDS NIH HHS K08 NS092912
6 · The paper itself

Abstract

The "cancer immunogenomics" paradigm has facilitated the search for tumor-specific antigens over the last 4 years by applying comprehensive cancer genomics to tumor antigen discovery. We applied this methodology to identify tumor-specific "neoantigens" in the C57BL/6-derived GL261 and VM/Dk-derived SMA-560 tumor models. Following DNA whole-exome and RNA sequencing, high-affinity candidate neoepitopes were predicted and screened for immunogenicity by ELISPOT and tetramer analyses. GL261 and SMA-560 harbored 4,932 and 2,171 nonsynonymous exome mutations, respectively, of which less than half were expressed. To establish the immunogenicities of H-2K

Indexed as

AnimalsAntigens, NeoplasmBrain NeoplasmsCD8-Positive T-LymphocytesDisease Models, AnimalExomeGenes, MHC Class IGenomicsGlioblastomaMice, Inbred C57BLSequence Analysis, RNAAntigens, Neoplasm

Identifiers

PMID27799140
PMCPMC5215735
OpenAlexW2541023789

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.