Evidence map›Paper›PMID 27797852›Full record

ArticleEMBO reports2016

PARylation of the forkhead-associated domain protein DAWDLE regulates plant immunity.

Baomin Feng, Shisong Ma, Sixue Chen, Ning Zhu, Shuxin Zhang, Bin Yu, Yu Yu, Brandon Le, Xuemei Chen, Savithramma P Dinesh-Kumar and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
10.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Ubiquitination of Receptorsomes, Frontline of Plant Immunity.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Desiccation Tolerance as the Basis of Long-Term Seed Viability.International journal of molecular sciences · 2020
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Baomin FengDepartment of Biochemistry and Biophysics, Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, USA.
Shisong MaDepartment of Plant Biology, University of California, Davis, CA, USA.
Sixue ChenDepartment of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, USA.
Ning ZhuDepartment of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, USA.
Shuxin ZhangSchool of Biological Sciences & Center for Plant Science Innovation, University of Nebraska, Lincoln, NE, USA.
Bin YuSchool of Biological Sciences & Center for Plant Science Innovation, University of Nebraska, Lincoln, NE, USA.
Yu YuDepartment of Botany and Plant Sciences, Institute of Integrative Genome Biology and Howard Hughes Medical Institute, University of California, Riverside, CA, USA.
Brandon LeDepartment of Botany and Plant Sciences, Institute of Integrative Genome Biology and Howard Hughes Medical Institute, University of California, Riverside, CA, USA.
Xuemei ChenDepartment of Botany and Plant Sciences, Institute of Integrative Genome Biology and Howard Hughes Medical Institute, University of California, Riverside, CA, USA.
Savithramma P Dinesh-KumarDepartment of Plant Biology, University of California, Davis, CA, USA.
Libo ShanDepartment of Plant Pathology and Microbiology and Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, USA.
Ping HeDepartment of Biochemistry and Biophysics, Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, USA pinghe@tamu.edu.ORCID 0000-0002-5926-8349
Texas A&M University · USUniversity of California, Riverside · USUniversity of California, Davis · USUniversity of Florida · USUniversity of Nebraska–Lincoln · US

Funding

Differential regulation of plant innate immunityR01GM092893 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HE, PING · 2010 to 2022
$2.7M
Phosphorylation and ubiquitination of immune sensory complexes in innate immune signalingR01GM097247 · NIGMS · TEXAS A&M UNIVERSITY · PI SHAN, LIBO · 2011 to 2021
$2.4M
NIGMS NIH HHS R01 GM092893NIGMS NIH HHS R01 GM097247
6 · The paper itself

Abstract

Protein poly(ADP-ribosyl)ation (PARylation) primarily catalyzed by poly(ADP-ribose) polymerases (PARPs) plays a crucial role in controlling various cellular responses. However, PARylation targets and their functions remain largely elusive. Here, we deployed an Arabidopsis protein microarray coupled with in vitro PARylation assays to globally identify PARylation targets in plants. Consistent with the essential role of PARylation in plant immunity, the forkhead-associated (FHA) domain protein DAWDLE (DDL), one of PARP2 targets, positively regulates plant defense to both adapted and non-adapted pathogens. Arabidopsis PARP2 interacts with and PARylates DDL, which was enhanced upon treatment of bacterial flagellin. Mass spectrometry and mutagenesis analysis identified multiple PARylation sites of DDL by PARP2. Genetic complementation assays indicate that DDL PARylation is required for its function in plant immunity. In contrast, DDL PARylation appears to be dispensable for its previously reported function in plant development partially mediated by the regulation of microRNA biogenesis. Our study uncovers many previously unknown PARylation targets and points to the distinct functions of DDL in plant immunity and development mediated by protein PARylation and small RNA biogenesis, respectively.

Indexed as

Plant ImmunityArabidopsisArabidopsis ProteinsCarrier ProteinsFlagellinGene Expression Regulation, PlantGenetic Complementation TestMicroarray AnalysisPoly Adenosine Diphosphate RibosePoly(ADP-ribose) PolymerasesSignal TransductionArabidopsis ProteinsCarrier ProteinsDAWDLE protein, ArabidopsisFlagellinPoly Adenosine Diphosphate RibosePoly(ADP-ribose) PolymerasesFHA domain proteinimmune gene expressionplant immunityprotein poly(ADP‐ribosyl)ation (PARylation)

Identifiers

PMID27797852
PMCPMC5283580
OpenAlexW2533433563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.