Evidence map›Paper›PMID 27796486›Full record

ArticleCurrent genetics2017

Comparative genomics of Paracoccus sp. SM22M-07 isolated from coral mucus: insights into bacteria-host interactions.

Camila Carlos, Letícia Bianca Pereira, Laura Maria Mariscal Ottoboni

Abstract read
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In one paragraph

Article in Current genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Genome Structure of the Opportunistic PathogenFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Camila CarlosDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI, 53703, USA. camilacarlos@gmail.com.ORCID http://orcid.org/0000-0002-4574-1270
Letícia Bianca PereiraCenter for Molecular Biology and Genetic Engineering (CBMEG), State University of Campinas (UNICAMP), C. P. 6010, Campinas, SP, 13083-875, Brazil.
Laura Maria Mariscal OttoboniCenter for Molecular Biology and Genetic Engineering (CBMEG), State University of Campinas (UNICAMP), C. P. 6010, Campinas, SP, 13083-875, Brazil.
Universidade Estadual de Campinas (UNICAMP) · BRUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the main goals of coral microbiology is to understand the ways in which coral-bacteria associations are established and maintained. This work describes the sequencing of the genome of Paracoccus sp. SM22M-07 isolated from the mucus of the endemic Brazilian coral species Mussismilia hispida. Comparative analysis was used to identify unique genomic features of SM22M-07 that might be involved in its adaptation to the marine ecosystem and the nutrient-rich environment provided by coral mucus, as well as in the establishment and strengthening of the interaction with the host. These features included genes related to the type IV protein secretion system, erythritol catabolism, and succinoglycan biosynthesis. We experimentally confirmed the production of succinoglycan by Paracoccus sp. SM22M-07 and we hypothesize that it may be involved in the association of the bacterium with coral surfaces.

Indexed as

Genome, BacterialAnimalsAnthozoaBrazilDNA, BacterialEcosystemParacoccusPhylogenySymbiosisDNA, BacterialComparative genomicsCoral-associated bacteriaCoral microbiologyParacoccusSuccinoglycan

Identifiers

PMID27796486
OpenAlexW2542176596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.