Evidence map›Paper›PMID 27796453›Full record

ArticleAnalytical and bioanalytical chemistry2017

LC-MS/MS analysis of permethylated N-glycans facilitating isomeric characterization.

Shiyue Zhou, Xue Dong, Lucas Veillon, Yifan Huang, Yehia Mechref

Open access · greenAbstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 105 citations in OpenAlex.

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  17. Biomolecules · 2023
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  18. An Efficient and EconomicalMetabolites · 2022
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shiyue ZhouDepartment of Chemistry and Biochemistry, Texas Tech University, Memorial Circle & Boston, Box 41061, Lubbock, TX, 79409-1061, USA.
Xue DongDepartment of Chemistry and Biochemistry, Texas Tech University, Memorial Circle & Boston, Box 41061, Lubbock, TX, 79409-1061, USA.
Lucas VeillonDepartment of Chemistry and Biochemistry, Texas Tech University, Memorial Circle & Boston, Box 41061, Lubbock, TX, 79409-1061, USA.
Yifan HuangDepartment of Chemistry and Biochemistry, Texas Tech University, Memorial Circle & Boston, Box 41061, Lubbock, TX, 79409-1061, USA.
Yehia MechrefDepartment of Chemistry and Biochemistry, Texas Tech University, Memorial Circle & Boston, Box 41061, Lubbock, TX, 79409-1061, USA. yehia.mechref@ttu.edu.
Texas Tech University · US

Funding

Sensitive and Quantitative MS-bases Glycomic Mapping PlatformR01GM112490 · NIGMS · TEXAS TECH UNIVERSITY · PI MECHREF, YEHIA · 2014 to 2024
$3.2M
NIGMS NIH HHS R01 GM112490
6 · The paper itself

Abstract

The biosynthesis of glycans is a template-free process; hence compositionally identical glycans may contain highly heterogeneous structures. Meanwhile, the functions of glycans in biological processes are significantly influenced by the glycan structure. Structural elucidation of glycans is an essential component of glycobiology. Although NMR is considered the most powerful approach for structural glycan studies, it suffers from low sensitivity and requires highly purified glycans. Although mass spectrometry (MS)-based methods have been applied in numerous glycan structure studies, there are challenges in preserving glycan structure during ionization. Permethylation is an efficient derivatization method that improves glycan structural stability. In this report, permethylated glycans are isomerically separated; thus facilitating structural analysis of a mixture of glycans by LC-MS/MS. Separation by porous graphitic carbon liquid chromatography at high temperatures in conjunction with tandem mass spectrometry (PGC-LC-MS/MS) was utilized for unequivocal characterization of glycan isomers. Glycan fucosylation sites were confidently determined by eliminating fucose rearrangement and assignment of diagnostic ions, achieved by permethylation and PGC-LC at high temperatures, respectively. Assigning monosaccharide residues to specific glycan antennae was also achieved. Galactose linkages were also distinguished from each other by CID/HCD tandem MS. This was attainable because of the different bond energies associated with monosaccharide linkages. Graphical Abstract LC-MS and tandem MS of terminal galactose isomers.

Indexed as

Chromatography, LiquidTandem Mass SpectrometryIsomerismMethylationPolysaccharidesPolysaccharidesLC-MS/MSN-Glycan isomersPermethylationPorous graphitic carbon columnTandem mass spectrometry

Identifiers

PMID27796453
PMCPMC5444817
OpenAlexW2540201871

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.