Evidence map›Paper›PMID 27795413›Full record

ArticleJournal of virology2017

Ankyrin Repeat Proteins of Orf Virus Influence the Cellular Hypoxia Response Pathway.

Da-Yuan Chen, Jacqueline-Alba Fabrizio, Sarah E Wilkins, Keyur A Dave, Jeffrey J Gorman, Jonathan M Gleadle, Stephen B Fleming, Daniel J Peet, Andrew A Mercer

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Poxvirus Interactions with the Host Ubiquitin System.Pathogens (Basel, Switzerland) · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Da-Yuan ChenDepartment of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.
Jacqueline-Alba FabrizioSchool of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
Sarah E WilkinsSchool of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
Keyur A DaveProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, Queensland, Australia.
Jeffrey J GormanProtein Discovery Centre, QIMR Berghofer Medical Research Institute, Herston, Queensland, Australia.
Jonathan M GleadleDepartment of Renal Medicine, School of Medicine, Flinders University, Flinders Medical Centre, Bedford Park, South Australia, Australia.
Stephen B FlemingDepartment of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.
Daniel J PeetSchool of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia daniel.peet@adelaide.edu.au andy.mercer@otago.ac.nz.
Andrew A MercerDepartment of Microbiology and Immunology, University of Otago, Dunedin, New Zealand daniel.peet@adelaide.edu.au andy.mercer@otago.ac.nz.
University of Adelaide · AUUniversity of Otago · NZQIMR Berghofer Medical Research Institute · AUFlinders University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypoxia-inducible factor (HIF) is a transcriptional activator with a central role in regulating cellular responses to hypoxia. It is also emerging as a major target for viral manipulation of the cellular environment. Under normoxic conditions, HIF is tightly suppressed by the activity of oxygen-dependent prolyl and asparaginyl hydroxylases. The asparaginyl hydroxylase active against HIF, factor inhibiting HIF (FIH), has also been shown to hydroxylate some ankyrin repeat (ANK) proteins. Using bioinformatic analysis, we identified the five ANK proteins of the parapoxvirus orf virus (ORFV) as potential substrates of FIH. Consistent with this prediction, coimmunoprecipitation of FIH was detected with each of the ORFV ANK proteins, and for one representative ORFV ANK protein, the interaction was shown to be dependent on the ANK domain. Immunofluorescence studies revealed colocalization of FIH and the viral ANK proteins. In addition, mass spectrometry confirmed that three of the five ORFV ANK proteins are efficiently hydroxylated by FIH in vitro While FIH levels were unaffected by ORFV infection, transient expression of each of the ORFV ANK proteins resulted in derepression of HIF-1α activity in reporter gene assays. Furthermore, ORFV-infected cells showed upregulated HIF target gene expression. Our data suggest that sequestration of FIH by ORFV ANK proteins leads to derepression of HIF activity. These findings reveal a previously unknown mechanism of viral activation of HIF that may extend to other members of the poxvirus family. IMPORTANCE: The protein-protein binding motif formed from multiple repeats of the ankyrin motif is common among chordopoxviruses. However, information on the roles of these poxviral ankyrin repeat (ANK) proteins remains limited. Our data indicate that the parapoxvirus orf virus (ORFV) is able to upregulate hypoxia-inducible factor (HIF) target gene expression. This response is mediated by the viral ANK proteins, which sequester the HIF regulator FIH (factor inhibiting HIF). This is the first demonstration of any viral protein interacting directly with FIH. Our data reveal a new mechanism by which viruses reprogram HIF, a master regulator of cellular metabolism, and also show a new role for the ANK family of poxvirus proteins.

Indexed as

Ankyrin RepeatAmino Acid SequenceAnimalsCell HypoxiaComputational BiologyEscherichia coliGene Expression RegulationHEK293 CellsHeLa CellsHost-Pathogen InteractionsHumansHydroxylationHypoxia-Inducible Factor 1, alpha SubunitLeydig CellsMaleMixed Function OxygenasesHypoxia-Inducible Factor 1, alpha SubunitMixed Function OxygenasesRecombinant ProteinsRepressor Proteinsankyrin repeatfactor inhibiting HIFhypoxia-inducible factororf virusparapoxvirus

Identifiers

PMID27795413
PMCPMC5165212
OpenAlexW2541200758

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.