Evidence map›Paper›PMID 27795387›Full record

ArticlemBio2016

Dual-Reporter Mycobacteriophages (Φ2DRMs) Reveal Preexisting Mycobacterium tuberculosis Persistent Cells in Human Sputum.

Paras Jain, Brian C Weinrick, Eric J Kalivoda, Hui Yang, Vanisha Munsamy, Catherine Vilcheze, Torin R Weisbrod, Michelle H Larsen, Max R O'Donnell, Alexander Pym and 1 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 86 citations in OpenAlex.

  1. A new Persister Enrichment Model inbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Rapid detection of drug resistance inFrontiers in cellular and infection microbiology · 2025
    Article
  7. Tracking the progeny of bacterial persisters using a CRISPR-based genomic recorder.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Gallein and isoniazid act synergistically to attenuatebioRxiv : the preprint server for biology · 2024
    Article
  11. Regulatory role ofFrontiers in microbiology · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. The promises and limitations ofAntimicrobial agents and chemotherapy · 2023
    Article
  17. Article
  18. Infection and drug resistance · 2023
    Article
  19. Article
  20. A world without tuberculosis: moving from imagination to reality.The Journal of clinical investigation · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Paras JainDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Brian C WeinrickDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Eric J KalivodaDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Hui YangDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Vanisha MunsamyKwaZulu-Natal Research Institute for TB/HIV (K-RITH), Durban, South Africa.
Catherine VilchezeDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Torin R WeisbrodDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Michelle H LarsenDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA.
Max R O'DonnellDivision of Pulmonary, Columbia University Medical Center, New York, New York, USA.
Alexander PymKwaZulu-Natal Research Institute for TB/HIV (K-RITH), Durban, South Africa.
William R JacobsDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York,New York, USA jacobsw@hhmi.org.
Albert Einstein College of Medicine · USHoward Hughes Medical Institute · USCentre for the AIDS Programme of Research in South Africa · ZAUniversity of KwaZulu-Natal · ZA

Funding

Validation and Application of a Model for Human-like TB Latency in RabbitsU19AI111276 · NIAID · RBHS-NEW JERSEY MEDICAL SCHOOL · PI ALLAND, DAVID, HORSBURGH, CHARLES ROBERT · 2014 to 2020
$23.3M
Immunology/Pathology CoreP30AI051519 · NIAID · YESHIVA UNIVERSITY · PI GOLDSTEIN, HARRIS · 2003 to 2013
$18.6M
Molecular Genetic Analysis of Mycobacterium TuberculosisR37AI026170 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI WILLIAM Robert JACOBS · 2004 to 2026
$7.7M
Novel Reporter Phages to Detect Complex TB Drug Resistance and PersistenceR01AI114900 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Michelle H Larsen, Max O'Donnell · 2015 to 2026
$7.2M
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR01AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 2022
$7.1M
NIAID NIH HHS P30 AI051519NIAID NIH HHS R01 AI026170NIAID NIH HHS R01 AI114900NIAID NIH HHS R37 AI026170NIAID NIH HHS U19 AI111276
6 · The paper itself

Abstract

Persisters are the minor subpopulation of bacterial cells that lack alleles conferring resistance to a specific bactericidal antibiotic but can survive otherwise lethal concentrations of that antibiotic. In infections with Mycobacterium tuberculosis, such persisters underlie the need for long-term antibiotic therapy and contribute to treatment failure in tuberculosis cases. Here, we demonstrate the value of dual-reporter mycobacteriophages (Φ IMPORTANCE: Tuberculosis (TB) is again the leading cause of death from a single infectious disease, having surpassed HIV. The recalcitrance of the TB pandemic is largely due to the ability of the pathogen Mycobacterium tuberculosis to enter a persistent state in which it is less susceptible to antibiotics and immune effectors, necessitating lengthy treatment. It has been difficult to study persister cells, as we have lacked tools to isolate these rare cells. In this article, we describe the development of dual-reporter mycobacteriophages that encode a green fluorescent marker of viability and in which the promoters of genes we have identified as induced in the persister state are fused to a gene encoding a red fluorescent protein. We show that these tools can identify heterogeneity in a cell population that correlates with propensity to survive antibiotic treatment and that the proportions of these subpopulations change in M. tuberculosis cells within human sputum during the course of treatment.

Indexed as

Drug ToleranceBacteriological TechniquesFluorescenceGene Expression ProfilingGenes, ReporterHumansLuminescent ProteinsMycobacteriophagesMycobacterium tuberculosisSputumStaining and LabelingLuminescent Proteins

Identifiers

PMID27795387
PMCPMC5080378
OpenAlexW2537377728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.