Evidence map›Paper›PMID 27794119›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Nanometer-Scale Chemistry of a Calcite Biomineralization Template: Implications for Skeletal Composition and Nucleation.

Oscar Branson, Elisa A Bonnin, Daniel E Perea, Howard J Spero, Zihua Zhu, Maria Winters, Bärbel Hönisch, Ann D Russell, Jennifer S Fehrenbacher, Alexander C Gagnon

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 117 citations in OpenAlex.

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  8. Atom probe tomography.Nature reviews. Methods primers · 2021
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  14. Organic-mineral interfacial chemistry drives heterogeneous nucleation of Sr-rich (BaProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  15. Article
  16. Form and function of F-actin during biomineralization revealed from live experiments on foraminifera.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Oscar BransonDepartment of Earth and Planetary Sciences, University of California, Davis, CA 95616; oscarbranson@gmail.com hjspero@ucdavis.edu gagnon@uw.edu.ORCID 0000-0002-1851-497X
Elisa A BonninSchool of Oceanography, University of Washington, Seattle, WA 98195.
Daniel E PereaEnvironmental Molecular Science Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352.
Howard J SperoDepartment of Earth and Planetary Sciences, University of California, Davis, CA 95616; oscarbranson@gmail.com hjspero@ucdavis.edu gagnon@uw.edu.
Zihua ZhuEnvironmental Molecular Science Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352.
Maria WintersEnvironmental Molecular Science Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352.
Bärbel HönischDepartment of Earth and Environmental Sciences, Lamont-Doherty Earth Observatory of Columbia University, Palisades, NY 10964.
Ann D RussellDepartment of Earth and Planetary Sciences, University of California, Davis, CA 95616.
Jennifer S FehrenbacherDepartment of Earth and Planetary Sciences, University of California, Davis, CA 95616.
Alexander C GagnonSchool of Oceanography, University of Washington, Seattle, WA 98195; oscarbranson@gmail.com hjspero@ucdavis.edu gagnon@uw.edu.
Planetary Science Institute · USPacific Northwest National Laboratory · USUniversity of Washington · USLamont-Doherty Earth Observatory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plankton, corals, and other organisms produce calcium carbonate skeletons that are integral to their survival, form a key component of the global carbon cycle, and record an archive of past oceanographic conditions in their geochemistry. A key aspect of the formation of these biominerals is the interaction between organic templating structures and mineral precipitation processes. Laboratory-based studies have shown that these atomic-scale processes can profoundly influence the architecture and composition of minerals, but their importance in calcifying organisms is poorly understood because it is difficult to measure the chemistry of in vivo biomineral interfaces at spatially relevant scales. Understanding the role of templates in biomineral nucleation, and their importance in skeletal geochemistry requires an integrated, multiscale approach, which can place atom-scale observations of organic-mineral interfaces within a broader structural and geochemical context. Here we map the chemistry of an embedded organic template structure within a carbonate skeleton of the foraminifera Orbulina universa using both atom probe tomography (APT), a 3D chemical imaging technique with Ångström-level spatial resolution, and time-of-flight secondary ionization mass spectrometry (ToF-SIMS), a 2D chemical imaging technique with submicron resolution. We quantitatively link these observations, revealing that the organic template in O. universa is uniquely enriched in both Na and Mg, and contributes to intraskeletal chemical heterogeneity. Our APT analyses reveal the cation composition of the organic surface, offering evidence to suggest that cations other than Ca

Indexed as

AnimalsAnimal ShellsCalcification, PhysiologicCalcium CarbonateForaminiferaMagnesiumMass SpectrometryNanotechnologySodiumTomographyCalcium CarbonateMagnesiumSodiumbiomineralizationforaminiferageochemistrypaleoceanographytemplating

Identifiers

PMID27794119
PMCPMC5135321
OpenAlexW2541463001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.