Evidence map›Paper›PMID 27793835›Full record

ArticleBiology open2016

Biochemical pathways supporting beta-lactam biosynthesis in the springtail Folsomia candida.

Wouter Suring, Janine Mariën, Rhody Broekman, Nico M van Straalen, Dick Roelofs

Open access · goldAbstract read
In one paragraph

Article in Biology open, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wouter SuringDepartment of Ecological Science, Vrije Universiteit Amsterdam, De Boelelaan 1085-1087, Amsterdam 1081 HV, The Netherlands.
Janine MariënDepartment of Ecological Science, Vrije Universiteit Amsterdam, De Boelelaan 1085-1087, Amsterdam 1081 HV, The Netherlands.
Rhody BroekmanDepartment of Ecological Science, Vrije Universiteit Amsterdam, De Boelelaan 1085-1087, Amsterdam 1081 HV, The Netherlands.
Nico M van StraalenDepartment of Ecological Science, Vrije Universiteit Amsterdam, De Boelelaan 1085-1087, Amsterdam 1081 HV, The Netherlands.
Dick RoelofsDepartment of Ecological Science, Vrije Universiteit Amsterdam, De Boelelaan 1085-1087, Amsterdam 1081 HV, The Netherlands dick.roelofs@vu.nl.ORCID http://orcid.org/0000-0003-3954-3590
Vrije Universiteit Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, an active set of beta-lactam biosynthesis genes was reported in the genome of the arthropod springtail Folsomia candida (Collembola). Evidence was provided that these genes were acquired through horizontal gene transfer. However, successful integration of fungal- or bacterial-derived beta-lactam biosynthesis into the metabolism of an animal requires the beta-lactam precursor L-α-aminoadipic acid and a phosphopantetheinyl transferase for activation of the first enzyme of the pathway, δ-(L-α-aminoadipoyl)-L-cysteinyl-D-valine synthetase (ACVS). In this study, we characterized these supporting pathways and their transcriptional regulation in F. candida We identified one phosphopantetheinyl transferase and three pathways for L-α-aminoadipic acid production, distinct from the pathways utilized by microorganisms. We found that after heat shock, the phosphopantetheinyl transferase was co-regulated with ACVS, confirming its role in activating ACVS. Two of the three L-α-aminoadipic acid production pathways were downregulated, while PIPOX, an enzyme participating in the pipecolate pathway, was slightly co-regulated with ACVS. This indicates that L-α-aminoadipic acid may not be a limiting factor in beta-lactam biosynthesis in F. candida, in contrast to microorganisms. In conclusion, we show that all components for L-α-aminoadipic acid synthesis are present and transcriptionally active in F. candida This demonstrates how springtails could have recruited native enzymes to integrate a beta-lactam biosynthesis pathway into their metabolism after horizontal gene transfer.

Indexed as

Beta-lactamCollembolaGene expressionHeat shockL-α-aminoadipate

Identifiers

PMID27793835
PMCPMC5200902
OpenAlexW2541755133

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.