Evidence map›Paper›PMID 27793507›Full record

ArticleDNA repair2016

Proliferating cell nuclear antigen prevents trinucleotide repeat expansions by promoting repeat deletion and hairpin removal.

Jill M Beaver, Yanhao Lai, Shantell J Rolle, Yuan Liu

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Long non-coding RNANon-coding RNA research · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. The Rich World of p53 DNA Binding Targets: The Role of DNA Structure.International journal of molecular sciences · 2019
    Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jill M BeaverBiochemistry Ph.D. Program, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States.
Yanhao LaiDepartment of Chemistry and Biochemistry, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States.
Shantell J RolleDepartment of Chemistry and Biochemistry, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States.
Yuan LiuBiochemistry Ph.D. Program, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States; Department of Chemistry and Biochemistry, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States; Biomolecular Sciences Institute, School of Integrated Sciences and Humanities, Florida International University, 11200 SW 8th Street, Miami, FL 33199, United States. Electronic address: yualiu@fiu.edu.
Florida International University · US

Funding

Trinucleotide Repeat Instability via DNA Damage and RepairR01ES023569 · NIEHS · FLORIDA INTERNATIONAL UNIVERSITY · PI LIU, YUAN · 2014 to 2018
$1.6M
NIEHS NIH HHS R01 ES023569
6 · The paper itself

Abstract

DNA base lesions and base excision repair (BER) within trinucleotide repeat (TNR) tracts modulate repeat instability through the coordination among the key BER enzymes DNA polymerase β, flap endonuclease 1 (FEN1) and DNA ligase I (LIG I). However, it remains unknown whether BER cofactors can also alter TNR stability. In this study, we discovered that proliferating cell nuclear antigen (PCNA), a cofactor of BER, promoted CAG repeat deletion and removal of a CAG repeat hairpin during BER in a duplex CAG repeat tract and CAG hairpin loop, respectively. We showed that PCNA stimulated LIG I activity on a nick across a small template loop during BER in a duplex (CAG)

Indexed as

Base SequenceSequence DeletionTrinucleotide Repeat ExpansionDNA-(Apurinic or Apyrimidinic Site) LyaseDNA DamageDNA Ligase ATPDNA Polymerase betaDNA RepairFlap EndonucleasesGene ExpressionHumansNucleic Acid ConformationProliferating Cell Nuclear AntigenTrinucleotide RepeatsAPEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseDNA Ligase ATPDNA Polymerase betaFEN1 protein, humanFlap EndonucleasesLIG1 protein, humanProliferating Cell Nuclear AntigenBase excision repair (BER)DNA polymerase β (pol β)DNA repairFlap endonuclease 1 (FEN1)Proliferating cell nuclear antigen (PCNA)Trinucleotide repeats

Identifiers

PMID27793507
PMCPMC5333789
OpenAlexW2532420258

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.