Evidence map›Paper›PMID 27792189›Full record

ArticleInternational journal of molecular sciences2016

Non-SMC Element 2 (NSMCE2) of the SMC5/6 Complex Helps to Resolve Topological Stress.

Dideke E Verver, Yi Zheng, Dave Speijer, Ron Hoebe, Henk L Dekker, Sjoerd Repping, Jan Stap, Geert Hamer

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Review
  6. International journal of molecular sciences · 2023
    Article
  7. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. A Topology-Centric View on Mitotic Chromosome Architecture.International journal of molecular sciences · 2017
    Review
  20. DNA Damage and Repair in Degenerative Diseases 2016.International journal of molecular sciences · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Dideke E VerverCenter for Reproductive Medicine, Amsterdam Research Institute Reproduction and Development, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. emma.verver@nikon.com.
Yi ZhengCenter for Reproductive Medicine, Amsterdam Research Institute Reproduction and Development, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. y.zheng@amc.uva.nl.
Dave SpeijerDepartment of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. d.speijer@amc.uva.nl.
Ron HoebeDepartment of Cell Biology and Histology, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. r.a.hoebe@amc.uva.nl.
Henk L DekkerMass Spectrometry of Biomacromolecules, Swammerdam Institute for Life Sciences, University of Amsterdam, 1090 GE Amsterdam, The Netherlands. h.l.dekker@uva.nl.
Sjoerd ReppingCenter for Reproductive Medicine, Amsterdam Research Institute Reproduction and Development, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. s.repping@amc.uva.nl.
Jan StapDepartment of Cell Biology and Histology, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. j.stap@amc.uva.nl.
Geert HamerCenter for Reproductive Medicine, Amsterdam Research Institute Reproduction and Development, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands. g.hamer@amc.uva.nl.
Academic Medical Center · NLUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structural maintenance of chromosomes (SMC) protein complexes shape and regulate the structure and dynamics of chromatin, thereby controlling many chromosome-based processes such as cell cycle progression, differentiation, gene transcription and DNA repair. The SMC5/6 complex is previously described to promote DNA double-strand breaks (DSBs) repair by sister chromatid recombination, and found to be essential for resolving recombination intermediates during meiotic recombination. Moreover, in budding yeast, SMC5/6 provides structural organization and topological stress relief during replication in mitotically dividing cells. Despite the essential nature of the SMC5/6 complex, the versatile mechanisms by which SMC5/6 functions and its molecular regulation in mammalian cells remain poorly understood. By using a human osteosarcoma cell line (U2OS), we show that after the CRISPR-Cas9-mediated removal of the SMC5/6 subunit NSMCE2, treatment with the topoisomerase II inhibitor etoposide triggered an increased sensitivity in cells lacking NSMCE2. In contrast, NSMCE2 appeared not essential for a proper DNA damage response or cell survival after DSB induction by ionizing irradiation (IR). Interestingly, by way of immunoprecipitations (IPs) and mass spectrometry, we found that the SMC5/6 complex physically interacts with the DNA topoisomerase II α (TOP2A). We therefore propose that the SMC5/6 complex functions in resolving TOP2A-mediated DSB-repair intermediates generated during replication.

Indexed as

DNA Breaks, Double-StrandedDNA RepairAntigens, NeoplasmCell Cycle ProteinsCell Line, TumorCell SurvivalChromosomal Proteins, Non-HistoneCRISPR-Cas SystemsDNA-Binding ProteinsDNA Topoisomerases, Type IIEtoposideHumansLigasesPoly-ADP-Ribose Binding ProteinsProtein Interaction MapsTopoisomerase II InhibitorsAntigens, NeoplasmCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA Topoisomerases, Type IIEtoposideLigasesNSMCE2 protein, humanPoly-ADP-Ribose Binding ProteinsSMC5 protein, humanSMC6 protein, humanTOP2A protein, humanTopoisomerase II InhibitorsCRISPR-Cas9DNA double-strand breaks (DSBs)Ionizing Radiation (IR)Non-SMC Element 2 (NSMCE2)Structural Maintenance of Chromosomes 5/6 complex (SMC5/6)Topoisomerase II α (TOP2A)

Identifiers

PMID27792189
PMCPMC5133783
OpenAlexW2544373478

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.