Evidence map›Paper›PMID 27791356›Full record

ArticleAnalytical chemistry2016

Secondary Structure and Glycosylation of Mucus Glycoproteins by Raman Spectroscopies.

H Davies-Strickleton, Prabha Singh, Tanja Deckert-Gaudig, Volker Deckert, Karine Rousseau, Caroline E Ridley, Sarah E Dowd, Andrew J Doig, Paul D A Pudney, David J Thornton and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Analytical chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 48 citations in OpenAlex.

  1. A Coarse-Grained MARTINI Model for Mucins.Journal of chemical theory and computation · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Self-Assembling Polypeptides in Complex Coacervation.Accounts of chemical research · 2024
    Article
  7. Article
  8. Mirror Image Mucins and Thio Mucins with Tunable Biodegradation.Journal of the American Chemical Society · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Probing Membrane Receptors with Enhanced Raman Imaging.Proceedings of SPIE--the International Society for Optical Engineering · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 5 countries.

H Davies-StrickletonWellcome Trust Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester , Manchester M13 9PL, United Kingdom.
Prabha SinghInstitute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller University Jena , Helmholtzweg 4, 07743 Jena, Germany.
Tanja Deckert-GaudigLeibniz Institute of Photonic Technology , Albert-Einstein-Strasse 9, 07745 Jena, Germany.
Volker DeckertInstitute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller University Jena , Helmholtzweg 4, 07743 Jena, Germany.
Karine RousseauWellcome Trust Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester , Manchester M13 9PL, United Kingdom.
Caroline E RidleyWellcome Trust Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester , Manchester M13 9PL, United Kingdom.
Sarah E DowdSchool of Chemistry, Manchester Institute of Biotechnology, University of Manchester , Manchester M1 7DN, United Kingdom.
Andrew J DoigSchool of Chemistry, Manchester Institute of Biotechnology, University of Manchester , Manchester M1 7DN, United Kingdom.
Paul D A PudneyUnilever Discover , Sharnbrook, Bedfordshire MK44 1LQ, United Kingdom.
David J ThorntonWellcome Trust Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester , Manchester M13 9PL, United Kingdom.
Ewan W BlanchWellcome Trust Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester , Manchester M13 9PL, United Kingdom.
University of Manchester · GBHelmholtz Institute Jena · DEWellcome Centre for Cell-Matrix Research · GBLeibniz Institute of Photonic Technology · DERMIT University · AUUnilever (United Kingdom) · GB

Funding

Biotechnology and Biological Sciences Research CouncilWellcome TrustWellcome Trust 088785/Z/09/Z
6 · The paper itself

Abstract

The major structural components of protective mucus hydrogels on mucosal surfaces are the secreted polymeric gel-forming mucins. The very high molecular weight and extensive O-glycosylation of gel-forming mucins, which are key to their viscoelastic properties, create problems when studying mucins using conventional biochemical/structural techniques. Thus, key structural information, such as the secondary structure of the various mucin subdomains, and glycosylation patterns along individual molecules, remains to be elucidated. Here, we utilized Raman spectroscopy, Raman optical activity (ROA), circular dichroism (CD), and tip-enhanced Raman spectroscopy (TERS) to study the structure of the secreted polymeric gel-forming mucin MUC5B. ROA indicated that the protein backbone of MUC5B is dominated by unordered conformation, which was found to originate from the heavily glycosylated central mucin domain by isolation of MUC5B O-glycan-rich regions. In sharp contrast, recombinant proteins of the N-terminal region of MUC5B (D1-D2-D'-D3 domains, NT5B), C-terminal region of MUC5B (D4-B-C-CK domains, CT5B) and the Cys-domain (within the central mucin domain of MUC5B) were found to be dominated by the β-sheet. Using these findings, we employed TERS, which combines the chemical specificity of Raman spectroscopy with the spatial resolution of atomic force microscopy to study the secondary structure along 90 nm of an individual MUC5B molecule. Interestingly, the molecule was found to contain a large amount of α-helix/unordered structures and many signatures of glycosylation, pointing to a highly O-glycosylated region on the mucin.

Indexed as

GlycosylationHealthy VolunteersHumansMicroscopy, Atomic ForceMucin-5BProtein Structure, SecondarySpectrum Analysis, RamanMUC5B protein, humanMucin-5B

Identifiers

PMID27791356
PMCPMC5218386
OpenAlexW2542731716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.