Evidence map›Paper›PMID 27791166›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

NMR detection of intermolecular interaction sites in the dimeric 5'-leader of the HIV-1 genome.

Sarah C Keane, Verna Van, Heather M Frank, Carly A Sciandra, Sayo McCowin, Justin Santos, Xiao Heng, Michael F Summers

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Application of NMR to Large RNAs.Journal of molecular biology · 2025
    Review
  3. Article
  4. Selective [9-Chembiochem : a European journal of chemical biology · 2025
    Article
  5. Review
  6. Article
  7. Role of RNA structural plasticity in modulating HIV-1 genome packaging and translation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Sarah C KeaneHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Verna VanHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Heather M FrankHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Carly A SciandraHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Sayo McCowinHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Justin SantosHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250.
Xiao HengDepartment of Biochemistry, University of Missouri, Columbia, MO 65211 summers@hhmi.umbc.edu hengx@missouri.edu.
Michael F SummersHoward Hughes Medical Institute, University of Maryland Baltimore County, Baltimore, MD 21250; summers@hhmi.umbc.edu hengx@missouri.edu.

Funding

The MARC U*STAR Program at UMBCT34GM008663 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI ROBINSON, PHYLLIS R · 1997 to 2019
$21.9M
The Center for HIV RNA Studies (CRNA)P50GM103297 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAYIE, KWAKU · 2012 to 2016
$21.7M
NMR STUDIES OF RETROVIRAL NUCLEOCAPSID PROTEINSR01GM042561 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SUMMERS, MICHAEL FINLEY · 1994 to 2019
$9.4M
Howard Hughes Medical InstituteNIGMS NIH HHS P50 GM103297NIGMS NIH HHS R01 GM042561NIGMS NIH HHS T34 GM008663
6 · The paper itself

Abstract

HIV type-1 (HIV-1) contains a pseudodiploid RNA genome that is selected for packaging and maintained in virions as a noncovalently linked dimer. Genome dimerization is mediated by conserved elements within the 5'-leader of the RNA, including a palindromic dimer initiation signal (DIS) that has been proposed to form kissing hairpin and/or extended duplex intermolecular contacts. Here, we have applied a

Indexed as

5' Untranslated RegionsDimerizationGenome, ViralHIV-1Magnetic Resonance SpectroscopyRNA, Viral5' Untranslated RegionsRNA, Viral5′-leader5′-untranslated regionHIV-1RNAstructure

Identifiers

PMID27791166
PMCPMC5135362

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.