Evidence map›Paper›PMID 27791144›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

An evolutionary conserved Hexim1 peptide binds to the Cdk9 catalytic site to inhibit P-TEFb.

Lydia Kobbi, Emmanuelle Demey-Thomas, Floriane Braye, Florence Proux, Olga Kolesnikova, Joelle Vinh, Arnaud Poterszman, Olivier Bensaude

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 49 citations in OpenAlex.

  1. Structural basis for P-TEFb association with BRD4.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Progress in 7SK ribonucleoprotein structural biology.Frontiers in molecular biosciences · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Function-guided proximity mapping unveils electrophilic-metabolite sensing by proteins not present in their canonical locales.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Article
  18. Article
  19. CDK9 keeps RNA polymerase II on track.Cellular and molecular life sciences : CMLS · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lydia KobbiEcole Normale Supérieure, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U-1024, Université de Recherche Paris Sciences et Lettres, F-75230 Paris Cedex 05, France.
Emmanuelle Demey-ThomasSpectrométrie de Masse Biologique et Protéomique, Ecole Supérieure de Physique et Chimie Industrielle de la ville de Paris (ESPCI), CNRS Unité de Services et de Recherche (USR) 3149, Université de Recherche Paris Sciences et Lettres, F-75231 Paris Cedex 05, France.
Floriane BrayeEcole Normale Supérieure, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U-1024, Université de Recherche Paris Sciences et Lettres, F-75230 Paris Cedex 05, France.
Florence ProuxEcole Normale Supérieure, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U-1024, Université de Recherche Paris Sciences et Lettres, F-75230 Paris Cedex 05, France.
Olga KolesnikovaDepartment of Integrated Structural Biology, Institut de Génétique et de Biologie Moléculaire et Cellulaire, INSERM U964, UMR 7104, CNRS/Strasbourg University, 67404 Illkirch, France.
Joelle VinhSpectrométrie de Masse Biologique et Protéomique, Ecole Supérieure de Physique et Chimie Industrielle de la ville de Paris (ESPCI), CNRS Unité de Services et de Recherche (USR) 3149, Université de Recherche Paris Sciences et Lettres, F-75231 Paris Cedex 05, France.
Arnaud PoterszmanDepartment of Integrated Structural Biology, Institut de Génétique et de Biologie Moléculaire et Cellulaire, INSERM U964, UMR 7104, CNRS/Strasbourg University, 67404 Illkirch, France.
Olivier BensaudeEcole Normale Supérieure, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U-1024, Université de Recherche Paris Sciences et Lettres, F-75230 Paris Cedex 05, France; bensaude@biologie.ens.fr.
Centre National de la Recherche Scientifique · FRInserm · FRESPCI Paris · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The positive transcription elongation factor (P-TEFb) is required for the transcription of most genes by RNA polymerase II. Hexim proteins associated with 7SK RNA bind to P-TEFb and reversibly inhibit its activity. P-TEFb comprises the Cdk9 cyclin-dependent kinase and a cyclin T. Hexim proteins have been shown to bind the cyclin T subunit of P-TEFb. How this binding leads to inhibition of the kinase activity of Cdk9 has remained elusive, however. Using a photoreactive amino acid incorporated into proteins, we show that in live cells, cell extracts, and in vitro reconstituted complexes, Hexim1 cross-links and thus contacts Cdk9. Notably, replacement of a phenylalanine, F208, belonging to an evolutionary conserved Hexim1 peptide (

Indexed as

benzoyl phenylalaninecyclin-dependent kinase inhibitionprotein–protein cross-linkingregulatory noncoding RNAtranscription factor regulation

Identifiers

PMID27791144
PMCPMC5111705
OpenAlexW2532123105

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.