Evidence map›Paper›PMID 27791117›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Structural basis for nonneutralizing antibody competition at antigenic site II of the respiratory syncytial virus fusion protein.

Jarrod J Mousa, Marion F Sauer, Alexander M Sevy, Jessica A Finn, John T Bates, Gabriela Alvarado, Hannah G King, Leah B Loerinc, Rachel H Fong, Benjamin J Doranz and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Jarrod J MousaVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232.
Marion F SauerChemical and Physical Biology Program, Vanderbilt University Medical Center, Nashville, TN 37232.
Alexander M SevyChemical and Physical Biology Program, Vanderbilt University Medical Center, Nashville, TN 37232.
Jessica A FinnDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, TN 37232.
John T BatesVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232.ORCID 0000-0001-5545-6871
Gabriela AlvaradoDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, TN 37232.
Hannah G KingVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232.
Leah B LoerincVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232.
Rachel H FongIntegral Molecular, Inc., Philadelphia, PA 19104.
Benjamin J DoranzIntegral Molecular, Inc., Philadelphia, PA 19104.
Bruno E CorreiaDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037.
Oleksandr KalyuzhniyDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037.
Xiaolin WenDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.
Theodore S JardetzkyDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.
William R SchiefDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037.
Melanie D OhiDepartment of Cell and Developmental Biology, Vanderbilt University Medical Center, Nashville, TN 37232.
Jens MeilerDepartment of Chemistry, Vanderbilt University, Nashville, TN 37232.
James E CroweVanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232; james.crowe@vanderbilt.edu.ORCID 0000-0002-0049-1079
Vanderbilt University Medical Center · USVanderbilt University · USScripps Research Institute · USIntegral Molecular (United States) · USStanford University · US

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Structure based design of antibodies and vaccinesU19AI117905 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SCHIEF, WILLIAM R. · 2015 to 2019
$12.0M
Vanderbilt/Meharry Initiative for Minority Student DvptR25GM062459 · NIGMS · VANDERBILT UNIVERSITY · PI VELEZ EDWARDS, DIGNA R · 2002 to 2020
$10.4M
Vanderbilt Infection Pathogenesis and Epidemiology Research Training ProgramT32AI007474 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KALAMS, SPYROS A · 1995 to 2025
$6.9M
Crystallographic AutomationS10RR026915 · NCRR · VANDERBILT UNIVERSITY · PI IVERSON, T M · 2010 to 2010
$490k
GPU-Accelerated Parallel Computer for Drug Discovery ApplicationsS10OD020154 · OD · VANDERBILT UNIVERSITY · PI SMITH, JARROD ANSON · 2015 to 2015
$225k
NCATS NIH HHS UL1 TR000445NCRR NIH HHS S10 RR026915NIAID NIH HHS T32 AI007474NIAID NIH HHS U19 AI117905NIGMS NIH HHS R25 GM062459
6 · The paper itself

Abstract

Palivizumab was the first antiviral monoclonal antibody (mAb) approved for therapeutic use in humans, and remains a prophylactic treatment for infants at risk for severe disease because of respiratory syncytial virus (RSV). Palivizumab is an engineered humanized version of a murine mAb targeting antigenic site II of the RSV fusion (F) protein, a key target in vaccine development. There are limited reported naturally occurring human mAbs to site II; therefore, the structural basis for human antibody recognition of this major antigenic site is poorly understood. Here, we describe a nonneutralizing class of site II-specific mAbs that competed for binding with palivizumab to postfusion RSV F protein. We also describe two classes of site II-specific neutralizing mAbs, one of which escaped competition with nonneutralizing mAbs. An X-ray crystal structure of the neutralizing mAb 14N4 in complex with F protein showed that the binding angle at which human neutralizing mAbs interact with antigenic site II determines whether or not nonneutralizing antibodies compete with their binding. Fine-mapping studies determined that nonneutralizing mAbs that interfere with binding of neutralizing mAbs recognize site II with a pose that facilitates binding to an epitope containing F surface residues on a neighboring protomer. Neutralizing antibodies, like motavizumab and a new mAb designated 3J20 that escape interference by the inhibiting mAbs, avoid such contact by binding at an angle that is shifted away from the nonneutralizing site. Furthermore, binding to rationally and computationally designed site II helix-loop-helix epitope-scaffold vaccines distinguished neutralizing from nonneutralizing site II antibodies.

Indexed as

AnimalsAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAntibodies, NeutralizingAntibodies, ViralAntiviral AgentsCell LineCrystallography, X-RayEpitope MappingEpitopesHumansMiceMutagenesisPalivizumabRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus VaccinesAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAntibodies, NeutralizingAntibodies, ViralAntiviral AgentsEpitopesF protein, human respiratory syncytial virusmotavizumabPalivizumabRespiratory Syncytial Virus VaccinesViral Fusion ProteinsF proteinhuman respiratory syncytial virusneutralizing antibodies

Identifiers

PMID27791117
PMCPMC5098655
OpenAlexW2533150511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.