Evidence map›Paper›PMID 27791104›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation.

Zhenzhen Yang, Yeting Zhang, Eric K Wafula, Loren A Honaas, Paula E Ralph, Sam Jones, Christopher R Clarke, Siming Liu, Chun Su, Huiting Zhang and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Stolen chemistry, rewritten genes.Plant physiology · 2026
    Article
  3. Review
  4. Evolutionary innovation through fusion of sequences from across the tree of life.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Convergence and parallelism in the evolution of plant metabolism.Journal of integrative plant biology · 2026
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Mitochondrial Genome Characteristics Reveal Evolution ofInternational journal of molecular sciences · 2025
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Zhenzhen YangIntercollege Graduate Program in Plant Biology, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802.
Yeting ZhangDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Eric K WafulaDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Loren A HonaasIntercollege Graduate Program in Plant Biology, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802.
Paula E RalphDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Sam JonesIntercollege Graduate Program in Plant Biology, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802.
Christopher R ClarkeDepartment of Plant Pathology, Physiology and Weed Science, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061.
Siming LiuDepartment of Plant Sciences, University of California, Davis, CA 95616.
Chun SuDepartment of Biology, University of Virginia, Charlottesville, VA 22904.
Huiting ZhangIntercollege Graduate Program in Plant Biology, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802.
Naomi S AltmanDepartment of Statistics, The Pennsylvania State University, University Park, PA 16802.
Stephan C SchusterHuck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802.
Michael P TimkoDepartment of Biology, University of Virginia, Charlottesville, VA 22904.
John I YoderDepartment of Plant Sciences, University of California, Davis, CA 95616.
James H WestwoodDepartment of Plant Pathology, Physiology and Weed Science, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061.ORCID http://orcid.org/0000-0001-5127-7294
Claude W dePamphilisIntercollege Graduate Program in Plant Biology, Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802; cwd3@psu.edu.
Pennsylvania State University · USUniversity of California, Davis · USUniversity of Virginia · USVirginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer (HGT) is the transfer of genetic material across species boundaries and has been a driving force in prokaryotic evolution. HGT involving eukaryotes appears to be much less frequent, and the functional implications of HGT in eukaryotes are poorly understood. We test the hypothesis that parasitic plants, because of their intimate feeding contacts with host plant tissues, are especially prone to horizontal gene acquisition. We sought evidence of HGTs in transcriptomes of three parasitic members of Orobanchaceae, a plant family containing species spanning the full spectrum of parasitic capabilities, plus the free-living

Indexed as

genomic transferHGTparasitismphylogenomicsvalidation pipeline

Identifiers

PMID27791104
PMCPMC5111717
OpenAlexW2537908179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.