Evidence map›Paper›PMID 27790856›Full record

ArticleMicrobiologyOpen2017

A family of genus-specific RNAs in tandem with DNA-binding proteins control expression of the badA major virulence factor gene in Bartonella henselae.

Nhan Tu, Ronan K Carroll, Andy Weiss, Lindsey N Shaw, Gael Nicolas, Sarah Thomas, Amorce Lima, Udoka Okaro, Burt Anderson

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Emerging microbes & infections · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Autoregulation ofInternational journal of molecular sciences · 2019
    Article
  9. Review
  10. Molecular Mechanisms ofFrontiers in cellular and infection microbiology · 2018
    Review
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nhan TuDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Ronan K CarrollDepartment of Biological Sciences, Ohio University, Athens, OH, USA.
Andy WeissDepartment of Cellular, Molecular and Microbiology, College of Arts and Sciences, University of South Florida, Tampa, FL, USA.
Lindsey N ShawDepartment of Cellular, Molecular and Microbiology, College of Arts and Sciences, University of South Florida, Tampa, FL, USA.
Gael NicolasDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Sarah ThomasDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Amorce LimaDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Udoka OkaroDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Burt AndersonDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.

Funding

Characterization of ??S in the stress & virulence responses of S. aureusR01AI080626 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI SHAW, LINDSEY NEIL · 2010 to 2013
$1.3M
A novel zebrafish embryo model to define virulence factors of Bartonella henselaeR21AI102560 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI ANDERSON, BURT E · 2014 to 2015
$411k
NIAID NIH HHS R01 AI080626NIAID NIH HHS R21 AI102560
6 · The paper itself

Abstract

Bartonella henselae is a gram-negative zoonotic bacterium that causes infections in humans including endocarditis and bacillary angiomatosis. B. henselae has been shown to grow as large aggregates and form biofilms in vitro. The aggregative growth and the angiogenic host response requires the trimeric autotransporter adhesin BadA. We examined the transcriptome of the Houston-1 strain of B. henselae using RNA-seq revealing nine novel, highly-expressed intergenic transcripts (Bartonella regulatory transcript, Brt1-9). The Brt family of RNAs is unique to the genus Bartonella and ranges from 194 to 203 nucleotides with high homology and stable predicted secondary structures. Immediately downstream of each of the nine RNA genes is a helix-turn-helix DNA-binding protein (transcriptional regulatory protein, Trp1-9) that is poorly transcribed under the growth conditions used for RNA-seq. Using knockdown or overexpressing strains, we show a role of both the Brt1 and Trp1 in the regulation of badA and also in biofilm formation. Based on these data, we hypothesize that Brt1 is a trans-acting sRNA that also serves as a cis-acting riboswitch to control the expression of badA. This family of RNAs together with the downstream Trp DNA-binding proteins represents a novel coordinated regulatory circuit controlling expression of virulence-associated genes in the bartonellae.

Indexed as

Angiomatosis, BacillaryAnimalsBacterial ProteinsBartonella henselaeBase SequenceCtenocephalidesDNA-Binding ProteinsGene Expression Regulation, BacterialGene Knockdown TechniquesGenome, BacterialHumansMembrane Transport ProteinsRNA, BacterialSequence Analysis, RNATranscriptomeVirulence FactorsBacterial ProteinsBadA protein, Bartonella henselaeDNA-Binding ProteinsMembrane Transport ProteinsRNA, BacterialVirulence FactorsBartonella henselaegene regulationsRNAtranscriptional regulatortrimeric autotransporter adhesinxenobiotic response element

Identifiers

PMID27790856
PMCPMC5387305

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.