Evidence map›Paper›PMID 27790233›Full record

ArticleFrontiers in plant science2016

Genome-Wide Investigation of Hsf Genes in Sesame Reveals Their Segmental Duplication Expansion and Their Active Role in Drought Stress Response.

Komivi Dossa, Diaga Diouf, Ndiaga Cissé

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Molecular breeding for stress tolerance in sesame.Molecular genetics and genomics : MGG · 2025
    Review
  6. Article
  7. Article
  8. Life (Basel, Switzerland) · 2024
    Article
  9. Comparison ofPlants (Basel, Switzerland) · 2024
    Article
  10. Horticulture research · 2024
    Article
  11. Genome-Wide Identification ofInternational journal of molecular sciences · 2023
    Article
  12. Relationship between Photosynthetic COPlants (Basel, Switzerland) · 2023
    Article
  13. Review
  14. Article
  15. Review
  16. Improved assembly and annotation of the sesame genome.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022
    Article
  17. Article
  18. A Heat Shock Transcription FactorInternational journal of molecular sciences · 2022
    Article
  19. Evolution and co-evolution: insights into the divergence of plant heat shock factor genes.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  20. ThePlant direct · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Komivi DossaCentre d'Etudes Régional pour l'Amélioration de l'Adaptation à la SécheresseSénégal; Laboratoire Campus de Biotechnologies Végétales, Département de Biologie Végétale, Faculté des Sciences et Techniques, Université Cheikh Anta DiopDakar, Sénégal.
Diaga DioufLaboratoire Campus de Biotechnologies Végétales, Département de Biologie Végétale, Faculté des Sciences et Techniques, Université Cheikh Anta Diop Dakar, Sénégal.
Ndiaga CisséCentre d'Etudes Régional pour l'Amélioration de l'Adaptation à la Sécheresse Sénégal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sesame is a survivor crop cultivated for ages in arid areas under high temperatures and limited water conditions. Since its entire genome has been sequenced, revealing evolution, and functional characterization of its abiotic stress genes became a hot topic. In this study, we performed a whole-genome identification and analysis of Hsf gene family in sesame. Thirty genes encoding Hsf domain were found and classified into 3 major classes A, B, and C. The class A members were the most representative one and Hsf genes were distributed in 12 of the 16 linkage groups (except the LG 8, 9, 13, and 16). Evolutionary analysis revealed that, segmental duplication events which occurred around 67 MYA, were the primary force underlying Hsf genes expansion in sesame. Comparative analysis also suggested that sesame has retained most of its Hsf genes while its relatives viz. tomato and potato underwent extensive gene losses during evolution. Continuous purifying selection has played a key role in the maintenance of Hsf genes in sesame. Expression analysis of the Hsf genes in sesame revealed their putative involvement in multiple tissue-/developmental stages. Time-course expression profiling of Hsf genes in response to drought stress showed that 90% Hsfs are drought responsive. We infer that classes B-Hsfs might be the primary regulators of drought response in sesame by cooperating with some class A genes. This is the first insight into this gene family and the results provide some gene resources for future gene cloning and functional studies toward the improvement in stress tolerance of sesame.

Indexed as

droughtevolutionexpression profileHsf gene familysesame

Identifiers

PMID27790233
PMCPMC5061811

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